Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm15195-201ENSMUST00000118775 263 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm4540-201ENSMUST00000170669 429 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Mir3106-201ENSMUST00000175401 82 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm26061-201ENSMUST00000175584 108 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm4479-201ENSMUST00000178807 171 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm44656-201ENSMUST00000208428 490 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm9818-201ENSMUST00000050900 255 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm10780-201ENSMUST00000099459 285 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.25□□□□□ -1.89
Smarcb1Q9Z0H3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm13504-201ENSMUST00000117490 316 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm13359-201ENSMUST00000119000 695 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm28011-201ENSMUST00000184097 175 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm8242-202ENSMUST00000193056 475 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm19126-201ENSMUST00000207896 509 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm7530-201ENSMUST00000218466 605 ntBASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Smarcb1Q9Z0H3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm25168-201ENSMUST00000104189 132 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm12268-201ENSMUST00000118398 442 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm14901-201ENSMUST00000119001 283 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm24914-201ENSMUST00000157285 313 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm20651-201ENSMUST00000177219 329 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm27163-201ENSMUST00000184767 409 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm28113-201ENSMUST00000188280 229 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm37319-201ENSMUST00000193500 636 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm33973-201ENSMUST00000195148 534 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm42976-201ENSMUST00000200313 222 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm7946-201ENSMUST00000203326 958 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm25799-201ENSMUST00000082643 107 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm23846-201ENSMUST00000083835 107 ntBASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm12782-201ENSMUST00000117519 727 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm11253-201ENSMUST00000118486 201 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm12954-201ENSMUST00000118610 611 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm12723-201ENSMUST00000120700 451 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm3835-201ENSMUST00000120752 403 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm15061-201ENSMUST00000121076 1046 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm12095-201ENSMUST00000121962 816 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm24592-201ENSMUST00000122505 106 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 Gm16359-201ENSMUST00000124511 289 ntBASIC3.22□□□□□ -1.89
Smarcb1Q9Z0H3 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms