Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Scn8aQ9WTU3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC2.71□□□□□ -1.98
Scn8aQ9WTU3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm11456-201ENSMUST00000121070 256 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm25153-201ENSMUST00000157118 156 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm5263-201ENSMUST00000163646 601 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 AC124356.2-201ENSMUST00000221874 336 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm37407-201ENSMUST00000194793 1316 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm25270-201ENSMUST00000122606 138 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm20656-201ENSMUST00000176925 518 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm2691-201ENSMUST00000203205 901 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm18193-201ENSMUST00000210017 772 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.7□□□□□ -1.98
Scn8aQ9WTU3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm6574-201ENSMUST00000120037 362 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm26277-201ENSMUST00000157097 152 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm23716-201ENSMUST00000157348 144 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm22651-201ENSMUST00000157872 94 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm29356-201ENSMUST00000186935 373 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm19761-201ENSMUST00000205372 391 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm4945-201ENSMUST00000075152 453 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm22752-201ENSMUST00000102083 109 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm12757-201ENSMUST00000119465 800 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm14804-201ENSMUST00000122322 508 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm22254-201ENSMUST00000179186 110 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Gm19232-201ENSMUST00000211621 652 ntBASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn8aQ9WTU3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 Gm8260-201ENSMUST00000119230 353 ntBASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 Gm20718-201ENSMUST00000176058 259 ntBASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 Gm28923-201ENSMUST00000187755 322 ntBASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 Gm36994-201ENSMUST00000192941 492 ntBASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 AC156559.1-201ENSMUST00000224158 222 ntBASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 Gm12667-201ENSMUST00000118299 1332 ntBASIC2.68□□□□□ -1.98
Scn8aQ9WTU3 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm15244-201ENSMUST00000121122 130 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm14977-201ENSMUST00000121626 812 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm25150-201ENSMUST00000157121 60 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm24780-201ENSMUST00000157635 143 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm20660-201ENSMUST00000177515 289 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm27786-201ENSMUST00000184337 70 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm8242-202ENSMUST00000193056 475 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm17967-201ENSMUST00000195319 647 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm45678-201ENSMUST00000210509 295 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm13349-201ENSMUST00000118436 411 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm11876-201ENSMUST00000120002 269 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm13581-201ENSMUST00000120675 278 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm12001-201ENSMUST00000121727 913 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm16569-201ENSMUST00000160526 314 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm4468-201ENSMUST00000170206 294 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm23268-201ENSMUST00000175494 78 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Gm43368-201ENSMUST00000200638 409 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.67□□□□□ -1.98
Scn8aQ9WTU3 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms