Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Gm16111-201ENSMUST00000162128 285 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 Mir6406-201ENSMUST00000183592 120 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 Gm18026-201ENSMUST00000222789 727 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Scn11aQ9R053 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Gm19080-201ENSMUST00000196082 550 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn11aQ9R053 Gm25202-201ENSMUST00000082838 191 ntBASIC3.2□□□□□ -1.9
Scn11aQ9R053 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.19□□□□□ -1.9
Scn11aQ9R053 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn11aQ9R053 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn11aQ9R053 Gm24671-201ENSMUST00000104159 158 ntBASIC3.19□□□□□ -1.9
Scn11aQ9R053 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn11aQ9R053 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn11aQ9R053 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn11aQ9R053 Gm27796-201ENSMUST00000183863 261 ntBASIC3.19□□□□□ -1.9
Scn11aQ9R053 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Scn11aQ9R053 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.19□□□□□ -1.9
Scn11aQ9R053 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.19□□□□□ -1.9
Scn11aQ9R053 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.19□□□□□ -1.9
Scn11aQ9R053 Gm23264-201ENSMUST00000083372 107 ntBASIC3.19□□□□□ -1.9
Scn11aQ9R053 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn11aQ9R053 Gm5396-201ENSMUST00000121222 532 ntBASIC3.18□□□□□ -1.9
Scn11aQ9R053 Gm13024-201ENSMUST00000121756 718 ntBASIC3.18□□□□□ -1.9
Scn11aQ9R053 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.18□□□□□ -1.9
Scn11aQ9R053 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Scn11aQ9R053 Gm22330-201ENSMUST00000158068 115 ntBASIC3.18□□□□□ -1.9
Scn11aQ9R053 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.18□□□□□ -1.9
Scn11aQ9R053 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.18□□□□□ -1.9
Scn11aQ9R053 Gm43512-201ENSMUST00000198495 176 ntBASIC3.18□□□□□ -1.9
Scn11aQ9R053 Gm43415-201ENSMUST00000201934 750 ntBASIC3.18□□□□□ -1.9
Scn11aQ9R053 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.18□□□□□ -1.9
Scn11aQ9R053 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Scn11aQ9R053 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn11aQ9R053 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn11aQ9R053 Mir682-201ENSMUST00000102281 96 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm12956-201ENSMUST00000122184 414 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm24210-201ENSMUST00000158263 133 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm8807-201ENSMUST00000179328 492 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm23063-201ENSMUST00000102350 93 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm17030-201ENSMUST00000167016 393 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm19253-201ENSMUST00000204279 307 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm45678-201ENSMUST00000210509 295 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.17□□□□□ -1.9
Scn11aQ9R053 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Snord21-201ENSMUST00000082519 94 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Gm22622-201ENSMUST00000082870 129 ntBASIC3.17□□□□□ -1.9
Scn11aQ9R053 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn11aQ9R053 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn11aQ9R053 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn11aQ9R053 Mir294-201ENSMUST00000104710 84 ntBASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Scn11aQ9R053 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.16□□□□□ -1.9
Scn11aQ9R053 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.16□□□□□ -1.9
Scn11aQ9R053 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm23738-201ENSMUST00000082828 171 ntBASIC3.16□□□□□ -1.9
Scn11aQ9R053 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.16□□□□□ -1.9
Scn11aQ9R053 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.15□□□□□ -1.9
Scn11aQ9R053 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.9
Scn11aQ9R053 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.15□□□□□ -1.9
Scn11aQ9R053 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.15□□□□□ -1.9
Scn11aQ9R053 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.15□□□□□ -1.9
Scn11aQ9R053 Gm43704-201ENSMUST00000196164 496 ntBASIC3.15□□□□□ -1.9
Scn11aQ9R053 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.15□□□□□ -1.9
Scn11aQ9R053 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Scn11aQ9R053 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms