Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm16171-201ENSMUST00000118004 324 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm13082-201ENSMUST00000118877 561 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm11600-201ENSMUST00000119592 240 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm11582-201ENSMUST00000121041 236 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm4916-201ENSMUST00000126139 642 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm24244-201ENSMUST00000157317 130 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm22889-201ENSMUST00000158639 58 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm25026-201ENSMUST00000175017 188 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Mir7056-201ENSMUST00000183776 59 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm28011-201ENSMUST00000184097 175 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Mir6911-201ENSMUST00000184241 69 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm36934-201ENSMUST00000192007 306 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm8790-201ENSMUST00000194108 322 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm44354-201ENSMUST00000196017 143 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm9309-201ENSMUST00000223537 546 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm23939-201ENSMUST00000082880 133 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm22839-201ENSMUST00000158436 304 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm20399-201ENSMUST00000174652 132 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Mir3112-201ENSMUST00000175431 82 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Mir5134-201ENSMUST00000175529 78 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm22307-201ENSMUST00000180019 107 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm5268-201ENSMUST00000189212 940 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm37416-201ENSMUST00000193596 318 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm44520-201ENSMUST00000205447 802 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm17838-201ENSMUST00000205872 876 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm45687-201ENSMUST00000209454 155 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm46233-201ENSMUST00000217831 449 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.01□□□□□ -1.93
Trem1Q9JKE2 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Trem1Q9JKE2 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
Trem1Q9JKE2 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm15560-201ENSMUST00000117107 643 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm15142-201ENSMUST00000121013 856 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm11982-201ENSMUST00000121480 314 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm1989-201ENSMUST00000126244 636 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm24914-201ENSMUST00000157285 313 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm22225-201ENSMUST00000157358 278 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm26148-201ENSMUST00000157430 68 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm23554-201ENSMUST00000157818 110 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Mir1251-201ENSMUST00000175486 84 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm37209-201ENSMUST00000194109 1276 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm43478-201ENSMUST00000200381 292 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm7468-201ENSMUST00000203900 652 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm44656-201ENSMUST00000208428 490 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3□□□□□ -1.93
Trem1Q9JKE2 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3□□□□□ -1.93
Trem1Q9JKE2 Gm18043-201ENSMUST00000216741 739 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms