Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm44371-201ENSMUST00000204148 467 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm44294-201ENSMUST00000205090 728 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm45438-201ENSMUST00000210242 564 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm39197-201ENSMUST00000212069 457 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm6462-201ENSMUST00000081488 304 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Upf1Q9EPU0 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm45884-201ENSMUST00000209540 3416 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm24275-201ENSMUST00000116780 146 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm11221-201ENSMUST00000117230 597 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm25177-201ENSMUST00000122634 117 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm10444-201ENSMUST00000126708 148 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm24225-201ENSMUST00000158825 98 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm16290-201ENSMUST00000161175 474 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm23638-201ENSMUST00000175073 126 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm23158-201ENSMUST00000175076 126 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm22907-201ENSMUST00000175198 126 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm22625-201ENSMUST00000175382 126 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm22875-201ENSMUST00000175449 126 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm27857-201ENSMUST00000176930 126 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm26268-201ENSMUST00000177685 126 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm23681-201ENSMUST00000178821 126 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm27940-201ENSMUST00000184449 98 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm29408-201ENSMUST00000187536 216 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm38076-201ENSMUST00000193889 450 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm7540-201ENSMUST00000219764 926 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm23627-201ENSMUST00000082459 107 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm23925-201ENSMUST00000082471 132 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm22502-201ENSMUST00000082488 107 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm24149-201ENSMUST00000082757 107 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Upf1Q9EPU0 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm23271-201ENSMUST00000104052 124 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm22656-201ENSMUST00000104199 171 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm22195-201ENSMUST00000116861 108 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm11322-201ENSMUST00000118095 435 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm7219-201ENSMUST00000119619 297 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm12294-201ENSMUST00000119723 490 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm13368-201ENSMUST00000122443 430 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm16362-201ENSMUST00000135189 214 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm8338-201ENSMUST00000163928 363 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Mir3964-201ENSMUST00000174898 74 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm26960-201ENSMUST00000182263 412 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm32447-201ENSMUST00000194265 697 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Mir7118-201ENSMUST00000197760 61 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm44989-201ENSMUST00000204749 217 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm44609-201ENSMUST00000207157 460 ntBASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.28□□□□□ -1.56
Upf1Q9EPU0 Gm45392-201ENSMUST00000210441 214 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms