Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc3Q9D6Y1 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Ccdc3Q9D6Y1 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm11471-201ENSMUST00000121824 198 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm17187-201ENSMUST00000164622 410 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm24350-202ENSMUST00000198309 132 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm19126-201ENSMUST00000207896 509 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm18871-201ENSMUST00000218655 745 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.99□□□□□ -1.93
Ccdc3Q9D6Y1 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm11321-201ENSMUST00000121257 902 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm14623-201ENSMUST00000121398 603 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm24958-201ENSMUST00000158009 97 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Mir3965-201ENSMUST00000175570 69 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm29602-201ENSMUST00000186887 442 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm43746-201ENSMUST00000200028 317 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.98□□□□□ -1.93
Ccdc3Q9D6Y1 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm14518-201ENSMUST00000117351 542 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm14463-201ENSMUST00000121117 498 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm26477-201ENSMUST00000122617 323 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm17117-201ENSMUST00000163665 299 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Mir3092-201ENSMUST00000174954 96 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Mir3106-201ENSMUST00000175401 82 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm26061-201ENSMUST00000175584 108 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm20612-201ENSMUST00000176318 236 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm28146-201ENSMUST00000185517 701 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm37629-201ENSMUST00000193635 1050 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm37428-201ENSMUST00000193886 137 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.97□□□□□ -1.93
Ccdc3Q9D6Y1 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.96□□□□□ -1.93
Ccdc3Q9D6Y1 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Ccdc3Q9D6Y1 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms