Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm10237-201ENSMUST00000078393 273 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm23297-201ENSMUST00000083184 127 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm26474-201ENSMUST00000116762 122 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm14101-201ENSMUST00000121502 473 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm23819-201ENSMUST00000158744 109 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Mir5127-201ENSMUST00000175295 71 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm18486-201ENSMUST00000184040 298 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm29288-201ENSMUST00000191582 901 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37085-201ENSMUST00000193780 196 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm42438-201ENSMUST00000197832 974 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm43992-201ENSMUST00000204358 197 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm7624-201ENSMUST00000209702 435 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm18585-201ENSMUST00000215197 556 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.86□□□□□ -1.79
Ccdc39Q9D5Y1 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm24831-201ENSMUST00000116778 126 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm14142-201ENSMUST00000117833 296 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm14577-201ENSMUST00000121134 256 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm22956-201ENSMUST00000122520 80 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm22107-201ENSMUST00000122548 100 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm22208-201ENSMUST00000122658 110 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm23234-201ENSMUST00000157304 134 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm24773-201ENSMUST00000158513 99 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm23583-201ENSMUST00000158533 289 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm5929-201ENSMUST00000166883 487 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm22693-201ENSMUST00000175049 442 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Mir6914-201ENSMUST00000184999 69 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm32340-201ENSMUST00000192883 259 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37431-201ENSMUST00000195102 111 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm42976-201ENSMUST00000200313 222 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm31520-201ENSMUST00000203048 733 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm45814-201ENSMUST00000212646 775 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm8274-201ENSMUST00000219820 463 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm9818-201ENSMUST00000050900 255 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm9845-201ENSMUST00000056409 598 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm22575-201ENSMUST00000082981 110 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Mir350-201ENSMUST00000083639 99 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.85□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm12568-201ENSMUST00000117362 624 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm13803-201ENSMUST00000117547 489 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms