Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm25156-201ENSMUST00000179809 79 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm27660-201ENSMUST00000184028 208 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm28594-201ENSMUST00000187022 661 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm29097-201ENSMUST00000190273 422 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm43586-201ENSMUST00000195948 310 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm42665-201ENSMUST00000202100 586 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm33626-201ENSMUST00000206790 828 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm45380-201ENSMUST00000210465 315 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm45327-201ENSMUST00000211612 565 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm46193-201ENSMUST00000219399 364 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Gm23848-201ENSMUST00000083826 106 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Ddx56Q9D0R4 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Mir466f-2-201ENSMUST00000104805 94 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm14878-201ENSMUST00000118167 293 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm13804-201ENSMUST00000119552 172 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm11359-201ENSMUST00000120039 567 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm13751-201ENSMUST00000120280 752 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm22199-201ENSMUST00000122660 126 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm25655-201ENSMUST00000158465 290 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm15796-201ENSMUST00000162135 204 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm17538-201ENSMUST00000168236 327 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm20701-201ENSMUST00000176082 347 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm22290-201ENSMUST00000177655 107 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm22583-201ENSMUST00000178031 107 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm24713-201ENSMUST00000178850 107 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm25448-201ENSMUST00000180065 107 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm37568-201ENSMUST00000191755 364 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm18100-201ENSMUST00000200897 452 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm6051-201ENSMUST00000201529 352 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm44757-201ENSMUST00000206373 157 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm45498-201ENSMUST00000210346 283 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 CT030662.1-201ENSMUST00000227380 232 ntBASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ddx56Q9D0R4 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.59□□□□□ -1.68
Ddx56Q9D0R4 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm11878-201ENSMUST00000117908 400 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm6797-201ENSMUST00000119440 512 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm12087-201ENSMUST00000121878 258 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm12368-201ENSMUST00000122251 434 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm25621-201ENSMUST00000157223 114 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm22536-201ENSMUST00000158171 134 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm21726-201ENSMUST00000179654 392 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm27883-201ENSMUST00000183941 102 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm27568-201ENSMUST00000184220 99 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm8392-201ENSMUST00000185647 835 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm28163-201ENSMUST00000187099 325 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm28927-201ENSMUST00000191528 272 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm36934-201ENSMUST00000192007 306 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm44391-201ENSMUST00000198490 93 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm19441-201ENSMUST00000221545 330 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 AC156790.3-201ENSMUST00000226200 254 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Gm22508-201ENSMUST00000082772 110 ntBASIC4.58□□□□□ -1.68
Ddx56Q9D0R4 Mir215-201ENSMUST00000083628 112 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 311.7 ms