Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm12884-201ENSMUST00000120371 325 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm26276-201ENSMUST00000157099 109 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm24914-201ENSMUST00000157285 313 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm23755-201ENSMUST00000157578 343 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm17194-201ENSMUST00000164610 348 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm22858-201ENSMUST00000174972 76 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Mir3060-201ENSMUST00000175339 83 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Mir6960-201ENSMUST00000183449 61 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Mir8103-201ENSMUST00000183945 107 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm42621-201ENSMUST00000198114 275 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm45192-201ENSMUST00000206749 283 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm19126-201ENSMUST00000207896 509 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm6012-201ENSMUST00000210821 730 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm46233-201ENSMUST00000217831 449 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm4987-201ENSMUST00000078326 408 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm25007-201ENSMUST00000083808 133 ntBASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RTRAFQ9CQE8 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm22758-201ENSMUST00000102275 96 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm12383-201ENSMUST00000120628 760 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm14581-201ENSMUST00000121726 198 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm15274-201ENSMUST00000131442 291 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm21979-201ENSMUST00000139887 291 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm15259-201ENSMUST00000151262 291 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm23540-201ENSMUST00000157543 164 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm24961-201ENSMUST00000157918 184 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Mir1947-201ENSMUST00000158235 85 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm22840-201ENSMUST00000158444 136 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm17655-201ENSMUST00000167969 255 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Mir3062-201ENSMUST00000174986 105 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm24520-201ENSMUST00000179510 110 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm26866-201ENSMUST00000180414 802 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Mir6401-201ENSMUST00000184499 109 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm6510-201ENSMUST00000195916 574 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm44137-201ENSMUST00000203670 367 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm19253-201ENSMUST00000204279 307 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm9655-201ENSMUST00000211321 1284 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 AC133101.1-201ENSMUST00000226939 1199 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RTRAFQ9CQE8 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm23431-201ENSMUST00000104006 107 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm26418-201ENSMUST00000104275 137 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm2288-201ENSMUST00000118560 638 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm11693-201ENSMUST00000119625 565 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm14159-201ENSMUST00000119832 451 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm24060-201ENSMUST00000157494 95 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm27592-201ENSMUST00000157729 126 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm17204-201ENSMUST00000167936 478 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm22853-201ENSMUST00000174974 131 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm22174-201ENSMUST00000175050 125 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm22692-201ENSMUST00000175055 125 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm27634-201ENSMUST00000175060 126 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm22460-201ENSMUST00000175269 124 ntBASIC2.49□□□□□ -2.01
RTRAFQ9CQE8 Gm25535-201ENSMUST00000175364 125 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms