Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm4557-201ENSMUST00000185826 907 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Gm4526-201ENSMUST00000186039 920 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Gm8708-201ENSMUST00000188500 906 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Gm43304-201ENSMUST00000196803 326 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Gm44879-201ENSMUST00000207007 503 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Gm45366-201ENSMUST00000209828 384 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.54□□□□□ -1.68
Trim8Q99PJ2 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm23691-201ENSMUST00000101878 107 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm15752-201ENSMUST00000117427 394 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm11429-201ENSMUST00000119089 144 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm11830-201ENSMUST00000120175 561 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm25456-201ENSMUST00000157952 109 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm24636-201ENSMUST00000158673 288 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm17081-201ENSMUST00000167363 478 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm22242-201ENSMUST00000175224 118 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Mir6986-201ENSMUST00000184483 58 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm44373-201ENSMUST00000196112 169 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm19147-201ENSMUST00000199622 652 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm44060-201ENSMUST00000204440 410 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm18306-201ENSMUST00000207338 569 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm29818-201ENSMUST00000218070 165 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.53□□□□□ -1.68
Trim8Q99PJ2 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Trim8Q99PJ2 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm12062-201ENSMUST00000117533 259 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm13650-201ENSMUST00000117729 433 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm11321-201ENSMUST00000121257 902 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm13419-201ENSMUST00000121711 271 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm15075-201ENSMUST00000122187 477 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm22675-201ENSMUST00000158430 104 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm22940-201ENSMUST00000158560 155 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm27551-201ENSMUST00000184258 77 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm28847-201ENSMUST00000186778 700 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm29365-201ENSMUST00000189461 699 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm38150-201ENSMUST00000192996 452 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm17775-201ENSMUST00000198542 258 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm7692-201ENSMUST00000213534 409 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Gm6065-201ENSMUST00000081336 492 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim8Q99PJ2 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms