Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm26377-201ENSMUST00000102184 108 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm24376-201ENSMUST00000104399 127 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm22143-201ENSMUST00000157401 203 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm27903-201ENSMUST00000175482 126 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm43004-201ENSMUST00000201872 703 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm42850-201ENSMUST00000202094 201 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm20039-201ENSMUST00000210329 394 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm21007-201ENSMUST00000221024 326 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 AC131085.1-201ENSMUST00000224746 656 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm10161-201ENSMUST00000091506 204 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Nup88Q8CEC0 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm22497-201ENSMUST00000104499 131 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm23532-201ENSMUST00000104569 112 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm12509-201ENSMUST00000118033 609 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm13640-201ENSMUST00000118445 264 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm12294-201ENSMUST00000119723 490 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm6591-201ENSMUST00000121063 434 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm12858-201ENSMUST00000121913 208 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm14768-201ENSMUST00000122126 678 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm12998-201ENSMUST00000122445 789 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm23326-201ENSMUST00000157419 105 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm23312-201ENSMUST00000158774 102 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm14527-201ENSMUST00000179300 639 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm27733-201ENSMUST00000184803 68 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm37104-201ENSMUST00000193278 196 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm45327-201ENSMUST00000211612 565 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm45530-201ENSMUST00000211658 225 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 n-R5s196-201ENSMUST00000083136 117 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm22739-201ENSMUST00000083437 160 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.11□□□□□ -1.75
Nup88Q8CEC0 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Mir592-201ENSMUST00000102113 96 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm25967-201ENSMUST00000157168 147 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm23755-201ENSMUST00000157578 343 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Spanxn4-201ENSMUST00000172433 424 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm18358-201ENSMUST00000173179 1277 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm26141-201ENSMUST00000175299 126 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm29365-201ENSMUST00000189461 699 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm37698-201ENSMUST00000192605 463 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm6680-201ENSMUST00000192789 950 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nup88Q8CEC0 CT030161.1-201ENSMUST00000218411 124 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm8249-201ENSMUST00000219225 465 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm8274-201ENSMUST00000219820 463 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm18921-201ENSMUST00000221798 366 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.1□□□□□ -1.75
Nup88Q8CEC0 Gm9309-201ENSMUST00000223537 546 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms