Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm24961-201ENSMUST00000157918 184 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm25981-201ENSMUST00000157921 295 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm19203-201ENSMUST00000174049 939 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm25198-201ENSMUST00000178574 110 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm44076-201ENSMUST00000203072 520 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm9765-201ENSMUST00000043170 321 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm25630-201ENSMUST00000084000 162 ntBASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc38Q8CDN8 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm12383-201ENSMUST00000120628 760 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm12372-201ENSMUST00000121654 768 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm26349-201ENSMUST00000157530 130 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm18397-201ENSMUST00000176704 587 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm24754-201ENSMUST00000177997 107 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm4854-201ENSMUST00000185902 574 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm28847-201ENSMUST00000186778 700 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm29064-201ENSMUST00000187014 813 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm18505-201ENSMUST00000187360 790 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm29365-201ENSMUST00000189461 699 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm43227-201ENSMUST00000202239 677 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm44611-201ENSMUST00000207507 355 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm19563-201ENSMUST00000222031 270 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc38Q8CDN8 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm8569-201ENSMUST00000117630 647 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm15060-201ENSMUST00000119550 948 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm11582-201ENSMUST00000121041 236 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm22026-201ENSMUST00000122735 281 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm24914-201ENSMUST00000157285 313 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm16236-201ENSMUST00000159588 379 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm26141-201ENSMUST00000175299 126 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Mir5710-201ENSMUST00000176884 69 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm37417-201ENSMUST00000195257 454 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm19244-201ENSMUST00000204340 253 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm45105-201ENSMUST00000207824 397 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm34779-201ENSMUST00000210036 263 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm18015-201ENSMUST00000214879 316 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc38Q8CDN8 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms