Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm26254-201ENSMUST00000122491 118 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm23326-201ENSMUST00000157419 105 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm25981-201ENSMUST00000157921 295 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Mir1934-201ENSMUST00000158127 83 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm6510-201ENSMUST00000195916 574 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm9632-201ENSMUST00000195934 643 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm43979-201ENSMUST00000203179 475 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm44954-201ENSMUST00000208513 227 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm18645-201ENSMUST00000209593 651 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Lrif1Q8CDD9 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Lrif1Q8CDD9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm14879-201ENSMUST00000117308 507 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm15854-201ENSMUST00000118879 808 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm11913-201ENSMUST00000119094 336 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm12693-201ENSMUST00000121965 483 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm17655-201ENSMUST00000167969 255 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm24754-201ENSMUST00000177997 107 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm28002-201ENSMUST00000184832 100 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm28438-201ENSMUST00000188299 345 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm26439-201ENSMUST00000082592 106 ntBASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lrif1Q8CDD9 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm24273-201ENSMUST00000102332 164 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm22590-201ENSMUST00000104247 128 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm24890-201ENSMUST00000104389 102 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm15195-201ENSMUST00000118775 263 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm15026-201ENSMUST00000119219 458 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm11896-201ENSMUST00000121105 820 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm23602-201ENSMUST00000157258 132 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm25860-201ENSMUST00000158252 126 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm23312-201ENSMUST00000158774 102 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm23773-201ENSMUST00000158985 296 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm23775-201ENSMUST00000158991 249 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm26141-201ENSMUST00000175299 126 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Mir6408-201ENSMUST00000183643 91 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm27308-201ENSMUST00000184807 233 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm27964-201ENSMUST00000185195 62 ntBASIC3.26□□□□□ -1.89
Lrif1Q8CDD9 Gm29460-201ENSMUST00000188607 714 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms