Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Usp47Q8BY87 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC3.69□□□□□ -1.82
Usp47Q8BY87 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.69□□□□□ -1.82
Usp47Q8BY87 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.69□□□□□ -1.82
Usp47Q8BY87 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.69□□□□□ -1.82
Usp47Q8BY87 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Usp47Q8BY87 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Usp47Q8BY87 Gm10343-201ENSMUST00000096279 348 ntBASIC3.69□□□□□ -1.82
Usp47Q8BY87 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Usp47Q8BY87 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Usp47Q8BY87 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Usp47Q8BY87 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm9427-201ENSMUST00000116187 651 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm3757-201ENSMUST00000125878 675 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm28900-201ENSMUST00000185232 156 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm44845-201ENSMUST00000208773 335 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm45678-201ENSMUST00000210509 295 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm7540-201ENSMUST00000219764 926 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 AC159263.3-201ENSMUST00000223434 460 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.68□□□□□ -1.82
Usp47Q8BY87 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Usp47Q8BY87 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Usp47Q8BY87 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.67□□□□□ -1.82
Usp47Q8BY87 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Usp47Q8BY87 Gm24274-201ENSMUST00000116787 124 ntBASIC3.67□□□□□ -1.82
Usp47Q8BY87 Gm11943-201ENSMUST00000119473 327 ntBASIC3.67□□□□□ -1.82
Usp47Q8BY87 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.67□□□□□ -1.82
Usp47Q8BY87 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.67□□□□□ -1.82
Usp47Q8BY87 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.67□□□□□ -1.82
Usp47Q8BY87 Gm46996-201ENSMUST00000220924 408 ntBASIC3.67□□□□□ -1.82
Usp47Q8BY87 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.67□□□□□ -1.82
Usp47Q8BY87 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.67□□□□□ -1.82
Usp47Q8BY87 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 Gm13868-201ENSMUST00000122411 294 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.66□□□□□ -1.82
Usp47Q8BY87 Mir6905-201ENSMUST00000184228 70 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Usp47Q8BY87 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Usp47Q8BY87 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Usp47Q8BY87 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.66□□□□□ -1.82
Usp47Q8BY87 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Usp47Q8BY87 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.66□□□□□ -1.82
Usp47Q8BY87 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm11905-201ENSMUST00000117653 678 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm11285-201ENSMUST00000118443 322 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm23702-201ENSMUST00000158840 130 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm22254-201ENSMUST00000179186 110 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm38311-201ENSMUST00000192945 165 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm43476-201ENSMUST00000197873 405 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 Mir378a-201ENSMUST00000198300 66 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Mir365-2-201ENSMUST00000083555 112 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Usp47Q8BY87 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.65□□□□□ -1.82
Usp47Q8BY87 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.65□□□□□ -1.83
Usp47Q8BY87 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.65□□□□□ -1.83
Usp47Q8BY87 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.65□□□□□ -1.83
Usp47Q8BY87 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Usp47Q8BY87 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm16171-201ENSMUST00000118004 324 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm14877-201ENSMUST00000119803 478 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm6574-201ENSMUST00000120037 362 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm26352-201ENSMUST00000158223 125 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm22158-201ENSMUST00000158411 126 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm26171-201ENSMUST00000158422 131 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm19257-201ENSMUST00000186121 183 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm29335-201ENSMUST00000188361 459 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm5268-201ENSMUST00000189212 940 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.64□□□□□ -1.83
Usp47Q8BY87 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.64□□□□□ -1.83
Usp47Q8BY87 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms