Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm14835-201ENSMUST00000119039 315 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm7618-201ENSMUST00000121643 171 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm26556-201ENSMUST00000180645 320 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm18667-201ENSMUST00000186523 484 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm19503-201ENSMUST00000187109 241 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Gm26056-201ENSMUST00000083043 104 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Usp40Q8BWR4 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm10241-201ENSMUST00000117664 286 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm11761-201ENSMUST00000121392 445 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm11931-201ENSMUST00000121630 447 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm13852-201ENSMUST00000122350 242 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm26373-201ENSMUST00000157833 103 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm23782-201ENSMUST00000157939 120 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm21978-201ENSMUST00000179696 377 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm28408-201ENSMUST00000191557 463 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Mir466e-201ENSMUST00000198862 84 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm44161-201ENSMUST00000203532 253 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm44871-201ENSMUST00000207821 497 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 AC153141.1-201ENSMUST00000218636 501 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm23406-201ENSMUST00000082537 122 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm24207-201ENSMUST00000082781 108 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm25481-201ENSMUST00000083221 158 ntBASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usp40Q8BWR4 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Usp40Q8BWR4 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.65□□□□□ -1.51
Usp40Q8BWR4 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.65□□□□□ -1.51
Usp40Q8BWR4 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Usp40Q8BWR4 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Usp40Q8BWR4 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm26418-201ENSMUST00000104275 137 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm14605-201ENSMUST00000120599 268 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm14804-201ENSMUST00000122322 508 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm23214-201ENSMUST00000122716 157 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm23964-201ENSMUST00000157966 107 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm9071-201ENSMUST00000165915 474 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm27699-201ENSMUST00000183553 180 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm27773-201ENSMUST00000184087 78 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm28299-201ENSMUST00000189908 339 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm37603-201ENSMUST00000192368 219 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm37300-201ENSMUST00000193327 280 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm17954-201ENSMUST00000195893 607 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm44403-201ENSMUST00000198554 129 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Mir3970-201ENSMUST00000199287 90 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm44099-201ENSMUST00000203299 112 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm8231-201ENSMUST00000221617 783 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm7204-201ENSMUST00000062591 600 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usp40Q8BWR4 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Mir1193-201ENSMUST00000116761 121 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm11718-201ENSMUST00000119942 537 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm15263-201ENSMUST00000121556 642 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm11438-201ENSMUST00000121582 189 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm11344-201ENSMUST00000122011 335 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm22208-201ENSMUST00000122658 110 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm23959-201ENSMUST00000157208 324 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms