Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm12427-201ENSMUST00000117719 302 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm12954-201ENSMUST00000118610 611 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm14352-201ENSMUST00000119250 449 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm14810-201ENSMUST00000121628 486 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm9785-202ENSMUST00000144563 593 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm23084-201ENSMUST00000157850 114 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm25902-201ENSMUST00000158493 318 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm3370-201ENSMUST00000171785 500 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Mir3104-201ENSMUST00000174911 63 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm25026-201ENSMUST00000175017 188 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm23053-201ENSMUST00000175136 96 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm26866-201ENSMUST00000180414 802 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm29740-201ENSMUST00000193182 655 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm37523-201ENSMUST00000194901 412 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm44634-201ENSMUST00000206119 152 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm44611-201ENSMUST00000207507 355 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 AC155314.1-201ENSMUST00000227624 508 ntBASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc40Q8BI79 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm25313-201ENSMUST00000101817 116 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm24120-201ENSMUST00000103978 129 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm12149-201ENSMUST00000117511 654 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm9119-201ENSMUST00000118866 495 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm5762-201ENSMUST00000119204 258 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm14731-201ENSMUST00000119216 376 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm12335-201ENSMUST00000119738 327 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm14939-201ENSMUST00000120347 680 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm23592-201ENSMUST00000157859 117 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm22840-201ENSMUST00000158444 136 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm23775-201ENSMUST00000158991 249 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm23287-201ENSMUST00000179427 116 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm23143-201ENSMUST00000180137 116 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm19177-201ENSMUST00000204520 613 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm45588-201ENSMUST00000211213 630 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm25403-201ENSMUST00000082971 143 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Gm24871-201ENSMUST00000083099 116 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.59□□□□□ -1.83
Ccdc40Q8BI79 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc40Q8BI79 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm24890-201ENSMUST00000104389 102 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm15988-201ENSMUST00000118677 367 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm14975-201ENSMUST00000118741 664 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm22960-201ENSMUST00000122517 104 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Nron-204ENSMUST00000158971 370 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm38018-201ENSMUST00000195651 540 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm18384-201ENSMUST00000195974 808 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm18660-201ENSMUST00000199542 629 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm45742-201ENSMUST00000212400 433 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm5655-201ENSMUST00000221078 901 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm19563-201ENSMUST00000222031 270 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 LOC667541-201ENSMUST00000223408 278 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm22970-201ENSMUST00000083304 186 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm23452-201ENSMUST00000083327 107 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.58□□□□□ -1.84
Ccdc40Q8BI79 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms