Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC2.21□□□□□ -2.06
Ttc28Q80XJ3 Gm23472-201ENSMUST00000101806 191 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm24671-201ENSMUST00000104159 158 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm14793-201ENSMUST00000118739 311 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm25836-201ENSMUST00000158918 123 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm24497-201ENSMUST00000177868 191 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm25939-201ENSMUST00000179876 191 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm7204-201ENSMUST00000062591 600 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm23444-201ENSMUST00000082922 191 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Mir344e-201ENSMUST00000104677 66 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm13314-201ENSMUST00000118742 335 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Gm20074-201ENSMUST00000208144 484 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ttc28Q80XJ3 Mir758-201ENSMUST00000103260 81 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm26993-201ENSMUST00000182766 789 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm21006-201ENSMUST00000196930 667 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm42960-201ENSMUST00000202160 241 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm45395-201ENSMUST00000209891 559 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 AC117202.1-201ENSMUST00000227007 445 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm5268-201ENSMUST00000189212 940 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm37455-201ENSMUST00000191993 529 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm7957-201ENSMUST00000207404 2602 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm7530-201ENSMUST00000218466 605 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 BC022960-201ENSMUST00000119987 1815 ntBASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Ttc28Q80XJ3 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm27648-201ENSMUST00000184315 107 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm18026-201ENSMUST00000222789 727 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm14125-201ENSMUST00000113442 680 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm11943-201ENSMUST00000119473 327 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Mir669n-201ENSMUST00000158636 54 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm24876-201ENSMUST00000158780 92 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm37652-201ENSMUST00000195290 2095 ntBASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ttc28Q80XJ3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Mir542-201ENSMUST00000102186 85 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm24273-201ENSMUST00000102332 164 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm22713-201ENSMUST00000116895 130 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm13349-201ENSMUST00000118436 411 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm13862-201ENSMUST00000121220 197 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm27470-201ENSMUST00000184070 210 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm28650-201ENSMUST00000188413 411 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm44849-201ENSMUST00000207595 484 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm45588-201ENSMUST00000211213 630 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm23140-201ENSMUST00000082487 107 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm12849-201ENSMUST00000120013 739 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm23889-201ENSMUST00000122689 104 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm21999-201ENSMUST00000165985 387 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm37293-201ENSMUST00000191658 295 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm37579-201ENSMUST00000194291 142 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.17□□□□□ -2.06
Ttc28Q80XJ3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms