Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm2059-201ENSMUST00000212025 287 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ubfd1Q78JW9 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm26019-201ENSMUST00000104407 119 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm13082-201ENSMUST00000118877 561 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm13751-201ENSMUST00000120280 752 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm22204-201ENSMUST00000122654 327 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm2182-201ENSMUST00000145243 663 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm23167-201ENSMUST00000157155 103 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm22816-201ENSMUST00000157450 117 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm26373-201ENSMUST00000157833 103 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm22716-201ENSMUST00000177596 107 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm26701-201ENSMUST00000181571 234 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm27161-201ENSMUST00000183960 562 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm27190-201ENSMUST00000184890 542 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm18505-201ENSMUST00000187360 790 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm7182-201ENSMUST00000193351 732 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm43431-201ENSMUST00000198577 340 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 AC157017.2-201ENSMUST00000218354 777 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm8249-201ENSMUST00000219225 465 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm8274-201ENSMUST00000219820 463 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.11□□□□□ -1.75
Ubfd1Q78JW9 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm14627-201ENSMUST00000118931 567 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm11429-201ENSMUST00000119089 144 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm14428-201ENSMUST00000120408 822 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm14008-201ENSMUST00000120483 274 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm14362-201ENSMUST00000121679 273 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm25294-201ENSMUST00000122791 104 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm15254-201ENSMUST00000149567 273 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm23781-201ENSMUST00000157940 308 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm22968-201ENSMUST00000157955 118 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm22769-201ENSMUST00000158367 98 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm22135-201ENSMUST00000158752 108 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm17155-201ENSMUST00000165969 473 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm21729-201ENSMUST00000180058 664 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm21853-201ENSMUST00000180071 664 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm29495-201ENSMUST00000189319 664 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm28404-201ENSMUST00000190242 453 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm38044-201ENSMUST00000192964 487 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm43586-201ENSMUST00000195948 310 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm35702-201ENSMUST00000198653 511 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm42475-201ENSMUST00000201212 295 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm7468-201ENSMUST00000203900 652 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 Gm46138-201ENSMUST00000215294 426 ntBASIC4.1□□□□□ -1.75
Ubfd1Q78JW9 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms