Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm22725-201ENSMUST00000158092 110 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm25362-201ENSMUST00000158854 105 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm25156-201ENSMUST00000179809 79 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm28429-201ENSMUST00000188521 363 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm44776-201ENSMUST00000207212 381 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm18306-201ENSMUST00000207338 569 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm44648-201ENSMUST00000208267 329 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Gm9512-201ENSMUST00000223112 497 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 AC173482.4-201ENSMUST00000225096 348 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 AC133156.1-202ENSMUST00000227284 363 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf4Q6PFF0 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm13250-201ENSMUST00000117209 753 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm8595-201ENSMUST00000118250 630 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm11325-201ENSMUST00000119967 469 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm5401-201ENSMUST00000122444 365 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm25643-201ENSMUST00000158874 103 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm17086-201ENSMUST00000171346 484 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm23523-201ENSMUST00000180190 107 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm11395-201ENSMUST00000181011 499 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm11394-201ENSMUST00000181421 517 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Mir6971-201ENSMUST00000183497 63 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm29147-201ENSMUST00000186846 315 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm29159-201ENSMUST00000187969 379 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm28160-201ENSMUST00000191229 315 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm44336-201ENSMUST00000203696 468 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm45200-201ENSMUST00000207434 919 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 AC160863.1-201ENSMUST00000218412 317 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm23459-201ENSMUST00000083259 131 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm23451-201ENSMUST00000083328 122 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.67□□□□□ -1.66
Scaf4Q6PFF0 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm14706-201ENSMUST00000117744 255 ntBASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm16358-201ENSMUST00000146046 210 ntBASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm24618-201ENSMUST00000177718 94 ntBASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm23953-201ENSMUST00000178214 94 ntBASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm22448-201ENSMUST00000179254 107 ntBASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm8807-201ENSMUST00000179328 492 ntBASIC4.66□□□□□ -1.66
Scaf4Q6PFF0 Gm26332-201ENSMUST00000179813 94 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms