Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Rnf220Q6PDX6 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Rnf220Q6PDX6 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Rnf220Q6PDX6 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm24889-201ENSMUST00000104388 132 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm11432-201ENSMUST00000117334 231 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm15766-201ENSMUST00000118025 813 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm15399-201ENSMUST00000118055 724 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm14878-201ENSMUST00000118167 293 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm8217-201ENSMUST00000119136 465 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm5777-201ENSMUST00000177265 448 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm23450-201ENSMUST00000178285 91 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm24518-201ENSMUST00000180275 94 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Mir6400-201ENSMUST00000184870 92 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm5368-201ENSMUST00000189012 589 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm2497-201ENSMUST00000189539 601 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm38329-201ENSMUST00000193473 427 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm2926-201ENSMUST00000205625 239 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm17811-201ENSMUST00000206193 387 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm44776-201ENSMUST00000207212 381 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm45523-201ENSMUST00000210712 799 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 AC192333.1-201ENSMUST00000224573 376 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 AL590614.1-201ENSMUST00000226037 268 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm24037-201ENSMUST00000082871 180 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm26055-201ENSMUST00000083038 107 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm25682-201ENSMUST00000083942 164 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf220Q6PDX6 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm14537-201ENSMUST00000117464 599 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm14890-201ENSMUST00000117660 676 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm11693-201ENSMUST00000119625 565 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm9043-201ENSMUST00000119677 314 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm23228-201ENSMUST00000157296 270 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm25342-201ENSMUST00000157459 122 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm25909-201ENSMUST00000157619 121 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm24853-201ENSMUST00000158026 121 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Mir6372-201ENSMUST00000185114 109 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm18956-201ENSMUST00000192857 480 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm44391-201ENSMUST00000198490 93 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm44208-201ENSMUST00000205199 421 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm44648-201ENSMUST00000208267 329 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm45402-201ENSMUST00000211796 223 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rnf220Q6PDX6 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Rnf220Q6PDX6 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Rnf220Q6PDX6 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Rnf220Q6PDX6 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms