Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm3584-201ENSMUST00000173822 2565 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm13664-201ENSMUST00000117304 345 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm12137-201ENSMUST00000119565 346 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm22951-201ENSMUST00000179471 107 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm26983-201ENSMUST00000182051 388 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm27820-201ENSMUST00000183628 175 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Mir7031-201ENSMUST00000183860 65 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 AL645522.1-201ENSMUST00000197692 104 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm43393-201ENSMUST00000200147 194 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm34224-201ENSMUST00000204606 364 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm3086-202ENSMUST00000221248 310 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 AC161269.1-201ENSMUST00000228426 318 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm45697-201ENSMUST00000212893 2876 ntBASIC6.78□□□□□ -1.32
Scaf1Q5U4C3 Gm37831-201ENSMUST00000191685 1787 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm12876-201ENSMUST00000120975 408 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm15147-201ENSMUST00000122263 483 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm12854-201ENSMUST00000128518 297 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm5353-201ENSMUST00000139800 793 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm8580-201ENSMUST00000160295 464 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm23977-201ENSMUST00000177871 74 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm19726-201ENSMUST00000205008 240 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm46327-201ENSMUST00000218240 365 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 AC129308.2-201ENSMUST00000224588 789 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 AC172751.1-201ENSMUST00000226887 440 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 CT025548.1-201ENSMUST00000227459 257 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 AC138765.1-201ENSMUST00000228657 385 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm7665-201ENSMUST00000076710 297 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Snord59a-201ENSMUST00000082844 74 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 AC167420.1-201ENSMUST00000222999 2121 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 AC160130.1-201ENSMUST00000220734 2735 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Gm43320-201ENSMUST00000196047 2916 ntBASIC6.77□□□□□ -1.33
Scaf1Q5U4C3 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm45517-201ENSMUST00000209973 2468 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm12118-201ENSMUST00000119766 532 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm26278-201ENSMUST00000157098 132 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm2389-201ENSMUST00000160487 189 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Mir5624-201ENSMUST00000176635 61 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm6651-201ENSMUST00000189471 271 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm20923-201ENSMUST00000190009 319 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm38150-201ENSMUST00000192996 452 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm42666-201ENSMUST00000201954 152 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm44259-201ENSMUST00000204996 298 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm44927-201ENSMUST00000207573 716 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm5750-201ENSMUST00000218711 801 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 AC158803.3-201ENSMUST00000220024 211 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 CT572985.2-201ENSMUST00000220496 211 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm25937-201ENSMUST00000083912 107 ntBASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf1Q5U4C3 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms