Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc88aQ5SNZ0 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
Ccdc88aQ5SNZ0 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm14448-201ENSMUST00000116383 210 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm12401-201ENSMUST00000118435 228 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm22651-201ENSMUST00000157872 94 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm26585-201ENSMUST00000180890 630 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm37353-201ENSMUST00000194497 313 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm45312-201ENSMUST00000210566 311 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc88aQ5SNZ0 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm20542-201ENSMUST00000174582 372 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm23951-201ENSMUST00000104029 132 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm36985-201ENSMUST00000195595 379 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm26494-201ENSMUST00000083154 143 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm24493-201ENSMUST00000083805 143 ntBASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ccdc88aQ5SNZ0 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm6565-201ENSMUST00000121217 438 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Mir6386-201ENSMUST00000183558 104 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm28146-201ENSMUST00000185517 701 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm23677-201ENSMUST00000083156 104 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.19□□□□□ -1.9
Ccdc88aQ5SNZ0 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm14506-201ENSMUST00000121165 536 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm12956-201ENSMUST00000122184 414 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm23895-201ENSMUST00000158108 160 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm1833-201ENSMUST00000191608 682 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm19418-201ENSMUST00000197436 580 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm23702-201ENSMUST00000158840 130 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm37989-201ENSMUST00000195202 803 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm10212-201ENSMUST00000087884 324 ntBASIC3.18□□□□□ -1.9
Ccdc88aQ5SNZ0 Gm16171-201ENSMUST00000118004 324 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms