Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm42992-201ENSMUST00000197043 6836 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm25168-201ENSMUST00000104189 132 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm10552-201ENSMUST00000113396 372 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm12509-201ENSMUST00000118033 609 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm22160-201ENSMUST00000158405 328 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm32340-201ENSMUST00000192883 259 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm9134-201ENSMUST00000193186 551 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm38098-201ENSMUST00000194115 241 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm37801-201ENSMUST00000194754 274 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Gm37833-201ENSMUST00000194342 3256 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC9.01□□□□□ -0.97
Trim41Q5NCC3 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Trim41Q5NCC3 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trim41Q5NCC3 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm23142-201ENSMUST00000101848 105 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm26240-201ENSMUST00000101893 105 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Mir761-201ENSMUST00000103245 76 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm14825-201ENSMUST00000113538 701 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm14940-201ENSMUST00000119309 495 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm15807-201ENSMUST00000119880 1128 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm12486-201ENSMUST00000120887 541 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm12956-201ENSMUST00000122184 414 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Nron-204ENSMUST00000158971 370 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm8807-201ENSMUST00000179328 492 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm28769-201ENSMUST00000190176 615 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm44977-201ENSMUST00000205283 420 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm5045-201ENSMUST00000027054 810 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm24148-201ENSMUST00000082762 80 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim41Q5NCC3 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm45697-201ENSMUST00000212893 2876 ntBASIC9□□□□□ -0.97
Trim41Q5NCC3 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trim41Q5NCC3 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Trim41Q5NCC3 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm24867-201ENSMUST00000104161 107 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm24235-201ENSMUST00000104319 129 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Mir743b-201ENSMUST00000104751 77 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm11699-201ENSMUST00000119016 401 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm12413-201ENSMUST00000121508 312 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm6374-201ENSMUST00000159051 788 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm45236-201ENSMUST00000208632 229 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 AC133189.2-201ENSMUST00000228527 392 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm44584-201ENSMUST00000208395 2880 ntBASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trim41Q5NCC3 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Gm14910-201ENSMUST00000121037 1805 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Gm12311-201ENSMUST00000118803 374 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Gm11693-201ENSMUST00000119625 565 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 n-R5s201-201ENSMUST00000122622 116 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Zakit-201ENSMUST00000157677 308 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Gm25654-201ENSMUST00000158467 88 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Gm24106-201ENSMUST00000175498 127 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Gm25235-201ENSMUST00000179933 107 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 AC159203.2-201ENSMUST00000221326 193 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Mir471-201ENSMUST00000093596 67 ntBASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trim41Q5NCC3 AC147615.2-201ENSMUST00000219876 2154 ntBASIC8.97□□□□□ -0.97
Trim41Q5NCC3 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim41Q5NCC3 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms