Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Usp28Q5I043 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm3933-201ENSMUST00000195391 439 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Usp28Q5I043 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm18598-201ENSMUST00000207724 597 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.32□□□□□ -1.88
Usp28Q5I043 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Usp28Q5I043 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Usp28Q5I043 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Usp28Q5I043 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm44562-201ENSMUST00000207194 1347 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Usp28Q5I043 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.32□□□□□ -1.88
Usp28Q5I043 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp28Q5I043 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp28Q5I043 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm24715-201ENSMUST00000102377 95 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm12982-201ENSMUST00000117408 190 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm11229-201ENSMUST00000121993 437 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm22345-201ENSMUST00000122644 107 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm24734-201ENSMUST00000158860 262 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm9587-201ENSMUST00000172449 454 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Mir5098-201ENSMUST00000175320 82 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm29105-201ENSMUST00000187256 450 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm43814-201ENSMUST00000197851 413 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm42474-201ENSMUST00000201073 505 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm43975-201ENSMUST00000203023 481 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm44615-201ENSMUST00000206548 358 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm44954-201ENSMUST00000208513 227 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm45513-201ENSMUST00000210228 376 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp28Q5I043 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.31□□□□□ -1.88
Usp28Q5I043 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.31□□□□□ -1.88
Usp28Q5I043 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Usp28Q5I043 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp28Q5I043 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm22043-201ENSMUST00000082993 158 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Gm23455-201ENSMUST00000083331 100 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Mir325-201ENSMUST00000083491 98 ntBASIC3.31□□□□□ -1.88
Usp28Q5I043 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Mir291a-201ENSMUST00000104815 82 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm15244-201ENSMUST00000121122 130 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm14162-201ENSMUST00000121985 601 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm11575-201ENSMUST00000122243 228 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm23895-201ENSMUST00000158108 160 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm15974-201ENSMUST00000159103 531 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm2092-201ENSMUST00000178887 639 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm6900-201ENSMUST00000178971 342 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm2759-201ENSMUST00000179938 639 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm27733-201ENSMUST00000184803 68 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm37828-201ENSMUST00000192496 432 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm18340-201ENSMUST00000196342 609 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.3□□□□□ -1.88
Usp28Q5I043 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Gm6842-201ENSMUST00000211361 390 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.3□□□□□ -1.88
Usp28Q5I043 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.3□□□□□ -1.88
Usp28Q5I043 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Usp28Q5I043 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Usp28Q5I043 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms