Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Gm6374-201ENSMUST00000159051 788 ntBASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Gm27898-201ENSMUST00000183987 80 ntBASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Gm43804-201ENSMUST00000198280 456 ntBASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.42□□□□□ -1.86
Shank3Q4ACU6 Gm12492-201ENSMUST00000117665 564 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm18953-201ENSMUST00000175694 300 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Snora23-201ENSMUST00000082517 184 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Neat1-201ENSMUST00000173672 20771 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm24273-201ENSMUST00000102332 164 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm29335-201ENSMUST00000188361 459 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm43512-201ENSMUST00000198495 176 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Gm45879-201ENSMUST00000212521 392 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 AC142113.2-201ENSMUST00000217425 748 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 AC158536.1-201ENSMUST00000222510 256 ntBASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Shank3Q4ACU6 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Shank3Q4ACU6 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm26015-201ENSMUST00000104402 125 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm14448-201ENSMUST00000116383 210 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm12401-201ENSMUST00000118435 228 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm29610-201ENSMUST00000187749 453 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm5374-201ENSMUST00000222868 657 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Gm26458-201ENSMUST00000082832 128 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Shank3Q4ACU6 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm6574-201ENSMUST00000120037 362 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm6373-201ENSMUST00000121026 360 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Mir7039-201ENSMUST00000183852 85 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm18558-201ENSMUST00000186253 1214 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm44521-201ENSMUST00000206469 217 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 AC154838.2-201ENSMUST00000226602 747 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm12731-201ENSMUST00000120932 268 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm14848-201ENSMUST00000121850 467 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
Shank3Q4ACU6 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gm13880-201ENSMUST00000118421 474 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Gm11866-201ENSMUST00000120209 335 ntBASIC3.38□□□□□ -1.87
Shank3Q4ACU6 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms