Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm30280-201ENSMUST00000192214 262 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm43441-201ENSMUST00000201458 205 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm35876-201ENSMUST00000205044 459 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm44266-201ENSMUST00000205235 500 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm45380-201ENSMUST00000210465 315 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm18388-201ENSMUST00000222339 557 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm7099-201ENSMUST00000080066 554 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Gm10704-201ENSMUST00000098952 730 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim40Q3UWA4 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm23481-201ENSMUST00000104173 131 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm14794-201ENSMUST00000118181 192 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm12739-201ENSMUST00000119769 382 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm14810-201ENSMUST00000121628 486 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm23773-201ENSMUST00000158985 296 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm23145-201ENSMUST00000178912 79 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm27659-201ENSMUST00000183472 98 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Mir6345-201ENSMUST00000184286 128 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm27648-201ENSMUST00000184315 107 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Mir6914-201ENSMUST00000184999 69 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm29299-201ENSMUST00000185609 923 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm28384-201ENSMUST00000189079 463 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm29573-201ENSMUST00000190291 919 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm8242-202ENSMUST00000193056 475 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm37000-201ENSMUST00000193058 428 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm44050-201ENSMUST00000204263 527 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms