Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Gm8249-201ENSMUST00000219225 465 ntBASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Gm8274-201ENSMUST00000219820 463 ntBASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Platr25-208ENSMUST00000222602 939 ntBASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Upf3aQ3ULJ3 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm14119-201ENSMUST00000119511 235 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm15061-201ENSMUST00000121076 1046 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm20773-201ENSMUST00000178940 681 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm18660-201ENSMUST00000199542 629 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm43415-201ENSMUST00000201934 750 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm5322-201ENSMUST00000206142 699 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm17987-201ENSMUST00000206902 603 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm21089-201ENSMUST00000215843 325 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Olfr895-201ENSMUST00000093864 951 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.35□□□□□ -1.87
Upf3aQ3ULJ3 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm12587-201ENSMUST00000120180 427 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm3835-201ENSMUST00000120752 403 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm13502-201ENSMUST00000121574 684 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm6374-201ENSMUST00000159051 788 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm25598-201ENSMUST00000179031 107 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28390-201ENSMUST00000185212 700 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm9541-201ENSMUST00000188409 502 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm24350-202ENSMUST00000198309 132 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm23136-201ENSMUST00000083425 99 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm22444-201ENSMUST00000093693 108 ntBASIC3.34□□□□□ -1.87
Upf3aQ3ULJ3 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Upf3aQ3ULJ3 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Upf3aQ3ULJ3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Upf3aQ3ULJ3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Upf3aQ3ULJ3 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Upf3aQ3ULJ3 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Upf3aQ3ULJ3 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.34□□□□□ -1.88
Upf3aQ3ULJ3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Upf3aQ3ULJ3 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms