Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm26387-201ENSMUST00000104238 132 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm22091-201ENSMUST00000116908 127 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm14816-201ENSMUST00000117174 294 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm13314-201ENSMUST00000118742 335 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm15231-201ENSMUST00000119174 447 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm1866-201ENSMUST00000120701 477 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm13852-201ENSMUST00000122350 242 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm25104-201ENSMUST00000122476 163 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm15878-201ENSMUST00000127561 306 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm22395-201ENSMUST00000177427 96 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm27828-201ENSMUST00000184108 119 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm27611-201ENSMUST00000184690 108 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm28113-201ENSMUST00000188280 229 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm28267-201ENSMUST00000191093 265 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm44354-201ENSMUST00000196017 143 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm43814-201ENSMUST00000197851 413 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm22868-201ENSMUST00000083955 164 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Brf2Q3UAW9 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Mir690-201ENSMUST00000102110 109 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm22709-201ENSMUST00000116893 111 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm12252-201ENSMUST00000119517 219 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm15060-201ENSMUST00000119550 948 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm14815-201ENSMUST00000120060 488 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm9003-201ENSMUST00000121810 482 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm14129-201ENSMUST00000122436 291 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm23538-201ENSMUST00000157535 101 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm25386-201ENSMUST00000157814 288 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm2862-201ENSMUST00000161524 328 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Mir6960-201ENSMUST00000183449 61 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Mir6938-201ENSMUST00000184173 63 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm43104-201ENSMUST00000197234 311 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm42814-201ENSMUST00000199370 460 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm43224-201ENSMUST00000201567 898 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm8745-201ENSMUST00000207846 782 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm23518-201ENSMUST00000082835 153 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Mir30e-201ENSMUST00000083475 92 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm24490-201ENSMUST00000083803 98 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Brf2Q3UAW9 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm4736-201ENSMUST00000100870 380 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm23481-201ENSMUST00000104173 131 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm12149-201ENSMUST00000117511 654 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm11490-201ENSMUST00000118128 272 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm24910-201ENSMUST00000157289 272 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm25194-201ENSMUST00000177987 79 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm22917-201ENSMUST00000180116 110 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Gm26988-201ENSMUST00000183296 945 ntBASIC3.66□□□□□ -1.82
Brf2Q3UAW9 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms