Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm24622-201ENSMUST00000082619 162 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ddb1Q3U1J4 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm24318-201ENSMUST00000104490 131 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Mir883a-201ENSMUST00000104824 76 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm14973-201ENSMUST00000117248 255 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm14793-201ENSMUST00000118739 311 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm3788-201ENSMUST00000119949 136 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm12543-201ENSMUST00000120410 543 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm11321-201ENSMUST00000121257 902 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm14766-201ENSMUST00000121689 367 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm26320-201ENSMUST00000157742 306 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm25037-201ENSMUST00000175418 110 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm25451-201ENSMUST00000177832 121 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm23648-201ENSMUST00000180301 107 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm27539-201ENSMUST00000184971 224 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm8125-201ENSMUST00000216602 738 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm46994-201ENSMUST00000221523 219 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm22810-201ENSMUST00000082741 158 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm23506-201ENSMUST00000083077 107 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm23455-201ENSMUST00000083331 100 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm23097-201ENSMUST00000083448 105 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm26108-201ENSMUST00000083973 191 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ddb1Q3U1J4 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm9911-201ENSMUST00000211467 2802 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Mir676-201ENSMUST00000102443 89 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm11566-201ENSMUST00000118550 203 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm23981-201ENSMUST00000157136 106 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm24315-201ENSMUST00000177835 127 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm28596-201ENSMUST00000185870 696 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm32295-201ENSMUST00000192558 696 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm31260-201ENSMUST00000193478 696 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm43232-201ENSMUST00000201346 364 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm18306-201ENSMUST00000207338 569 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm45439-201ENSMUST00000211723 359 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 AC155923.1-201ENSMUST00000215676 356 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 AC157017.1-201ENSMUST00000220148 364 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 CT572983.1-201ENSMUST00000226895 514 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm23518-201ENSMUST00000082835 153 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm22293-201ENSMUST00000083314 109 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Gm42927-201ENSMUST00000200624 3841 ntBASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Ddb1Q3U1J4 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ddb1Q3U1J4 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms