Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm23465-201ENSMUST00000157134 262 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm24289-201ENSMUST00000157629 135 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm24751-201ENSMUST00000157844 102 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm22765-201ENSMUST00000158371 128 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm23579-201ENSMUST00000158528 103 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm25447-201ENSMUST00000158997 128 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm16545-201ENSMUST00000161968 463 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm17538-201ENSMUST00000168236 327 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm23047-201ENSMUST00000177661 94 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm23141-201ENSMUST00000178682 94 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm25314-201ENSMUST00000178810 79 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm21816-201ENSMUST00000179255 360 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Mir6238-201ENSMUST00000184140 129 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm43304-201ENSMUST00000196803 326 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm43144-201ENSMUST00000198256 485 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm18258-201ENSMUST00000210413 542 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm7786-201ENSMUST00000210494 436 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm18120-201ENSMUST00000220079 511 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm23096-201ENSMUST00000083447 107 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Gm42755-201ENSMUST00000198533 1493 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Usp39Q3TIX9 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm25088-201ENSMUST00000101803 79 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm13439-201ENSMUST00000117541 409 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm13804-201ENSMUST00000119552 172 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm6062-201ENSMUST00000120462 631 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm7840-201ENSMUST00000122086 533 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm2020-201ENSMUST00000145242 579 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm22378-201ENSMUST00000157481 111 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm22621-201ENSMUST00000179678 74 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm21978-201ENSMUST00000179696 377 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm27457-201ENSMUST00000184771 156 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm27564-201ENSMUST00000185196 96 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm28069-201ENSMUST00000189926 214 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm42758-201ENSMUST00000202146 283 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm45048-201ENSMUST00000207058 429 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm45049-201ENSMUST00000207586 591 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm44959-201ENSMUST00000209127 231 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm7034-201ENSMUST00000218638 645 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm18696-201ENSMUST00000220103 274 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm23627-201ENSMUST00000082459 107 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm22502-201ENSMUST00000082488 107 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm24149-201ENSMUST00000082757 107 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm26206-201ENSMUST00000082908 110 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Snord38a-201ENSMUST00000083746 71 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.36□□□□□ -1.71
Usp39Q3TIX9 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.35□□□□□ -1.71
Usp39Q3TIX9 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Usp39Q3TIX9 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Usp39Q3TIX9 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Usp39Q3TIX9 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.35□□□□□ -1.71
Usp39Q3TIX9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Usp39Q3TIX9 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
Usp39Q3TIX9 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.35□□□□□ -1.71
Usp39Q3TIX9 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms