Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm13172-201ENSMUST00000118685 256 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm12820-201ENSMUST00000119233 342 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm12739-201ENSMUST00000119769 382 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ebf1Q07802 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm23179-201ENSMUST00000158693 304 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm22290-201ENSMUST00000177655 107 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm22583-201ENSMUST00000178031 107 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm18828-202ENSMUST00000181035 310 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Mir6960-201ENSMUST00000183449 61 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm37603-201ENSMUST00000192368 219 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm8249-201ENSMUST00000219225 465 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm18116-201ENSMUST00000220920 537 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm24166-201ENSMUST00000082724 135 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm25929-201ENSMUST00000082784 107 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm22155-201ENSMUST00000083836 162 ntBASIC4.81□□□□□ -1.64
Ebf1Q07802 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ebf1Q07802 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ebf1Q07802 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ebf1Q07802 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ebf1Q07802 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.81□□□□□ -1.64
Ebf1Q07802 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ebf1Q07802 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm13250-201ENSMUST00000117209 753 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm13439-201ENSMUST00000117541 409 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm23214-201ENSMUST00000122716 157 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm8207-201ENSMUST00000171204 502 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm27414-201ENSMUST00000185033 381 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm29668-201ENSMUST00000187802 315 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm17956-201ENSMUST00000199931 838 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm43914-201ENSMUST00000203592 594 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.8□□□□□ -1.64
Ebf1Q07802 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.8□□□□□ -1.64
Ebf1Q07802 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ebf1Q07802 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ebf1Q07802 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Ebf1Q07802 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.79□□□□□ -1.64
Ebf1Q07802 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ebf1Q07802 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm24124-201ENSMUST00000104103 132 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm7164-201ENSMUST00000117503 450 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm12646-201ENSMUST00000119144 238 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm9043-201ENSMUST00000119677 314 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm12704-201ENSMUST00000119789 464 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm22383-201ENSMUST00000158188 327 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm25718-201ENSMUST00000158632 118 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm17148-201ENSMUST00000164702 249 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm11395-201ENSMUST00000181011 499 ntBASIC4.79□□□□□ -1.64
Ebf1Q07802 Gm11394-201ENSMUST00000181421 517 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms