Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col9a1Q05722 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm14472-201ENSMUST00000119815 282 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm15799-201ENSMUST00000120899 289 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm11645-201ENSMUST00000121589 649 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm25115-201ENSMUST00000157187 140 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Mir1967-201ENSMUST00000157789 82 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm16490-201ENSMUST00000165299 351 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm23925-202ENSMUST00000188429 132 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm18991-201ENSMUST00000209225 746 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm22061-201ENSMUST00000082557 107 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm23875-201ENSMUST00000083711 318 ntBASIC5.76□□□□□ -1.49
Col9a1Q05722 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col9a1Q05722 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.76□□□□□ -1.49
Col9a1Q05722 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col9a1Q05722 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Col9a1Q05722 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.75□□□□□ -1.49
Col9a1Q05722 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm14748-201ENSMUST00000119819 411 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm14810-201ENSMUST00000121628 486 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm23752-201ENSMUST00000157584 115 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm37836-201ENSMUST00000195875 175 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm43704-201ENSMUST00000196164 496 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Igkv1-108-201ENSMUST00000198926 298 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm16419-201ENSMUST00000221057 625 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 AC164304.1-201ENSMUST00000226920 272 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 AC123533.1-201ENSMUST00000227782 446 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm23039-201ENSMUST00000083870 161 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm17976-201ENSMUST00000184037 1909 ntBASIC5.75□□□□□ -1.49
Col9a1Q05722 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col9a1Q05722 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Col9a1Q05722 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col9a1Q05722 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm22003-201ENSMUST00000101885 107 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm12617-201ENSMUST00000121268 381 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm13214-201ENSMUST00000122137 408 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm26085-201ENSMUST00000157900 116 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm23860-201ENSMUST00000179446 132 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm22756-201ENSMUST00000180118 107 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm44776-201ENSMUST00000207212 381 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm45553-201ENSMUST00000209929 507 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 AC154213.2-201ENSMUST00000227138 187 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms