Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm23269-201ENSMUST00000178701 107 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm28146-201ENSMUST00000185517 701 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.74□□□□□ -1.65
Hmgb1P63158 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.74□□□□□ -1.65
Hmgb1P63158 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm43730-201ENSMUST00000199863 372 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm18414-201ENSMUST00000210858 694 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm18850-201ENSMUST00000211578 388 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm19563-201ENSMUST00000222031 270 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.74□□□□□ -1.65
Hmgb1P63158 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb1P63158 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm25856-201ENSMUST00000082786 75 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb1P63158 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.74□□□□□ -1.65
Hmgb1P63158 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Hmgb1P63158 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb1P63158 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb1P63158 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hmgb1P63158 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm14570-201ENSMUST00000119444 391 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm14945-201ENSMUST00000119556 1118 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm15168-201ENSMUST00000121057 316 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm16354-201ENSMUST00000155376 150 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm25283-201ENSMUST00000157272 77 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm25391-201ENSMUST00000157342 134 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm22849-201ENSMUST00000157713 307 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm23025-201ENSMUST00000158769 111 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm22355-201ENSMUST00000175531 96 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm4076-201ENSMUST00000179230 965 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm18982-201ENSMUST00000198118 529 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm44990-201ENSMUST00000203922 217 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm44657-201ENSMUST00000208568 450 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.73□□□□□ -1.65
Hmgb1P63158 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.73□□□□□ -1.65
Hmgb1P63158 AC124729.1-202ENSMUST00000225587 938 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Mir103-2-201ENSMUST00000083629 86 ntBASIC4.73□□□□□ -1.65
Hmgb1P63158 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hmgb1P63158 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Hmgb1P63158 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm23014-201ENSMUST00000104144 130 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm25563-201ENSMUST00000104603 74 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm12782-201ENSMUST00000117519 727 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm11407-201ENSMUST00000120362 1058 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm14982-201ENSMUST00000121102 442 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm13745-201ENSMUST00000121994 527 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm14562-201ENSMUST00000129885 543 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Mir3066-201ENSMUST00000175296 83 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm27520-201ENSMUST00000184872 81 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm28976-201ENSMUST00000188070 144 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm36966-201ENSMUST00000192217 413 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm45590-201ENSMUST00000209715 262 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm45651-201ENSMUST00000210857 335 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm46138-201ENSMUST00000215294 426 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.72□□□□□ -1.65
Hmgb1P63158 AC132918.1-201ENSMUST00000227877 925 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hmgb1P63158 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hmgb1P63158 Gm26055-201ENSMUST00000083038 107 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hmgb1P63158 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Hmgb1P63158 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hmgb1P63158 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hmgb1P63158 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.72□□□□□ -1.65
Hmgb1P63158 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.71□□□□□ -1.65
Hmgb1P63158 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Hmgb1P63158 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Hmgb1P63158 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms