Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.56□□□□□ -2
Tnfsf4P43488 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Tnfsf4P43488 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Tnfsf4P43488 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Tnfsf4P43488 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Tnfsf4P43488 Gm22115-201ENSMUST00000103976 133 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm23923-201ENSMUST00000104108 133 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Tnfsf4P43488 Gm14621-201ENSMUST00000117709 689 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm11577-201ENSMUST00000118030 737 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm12448-201ENSMUST00000118852 655 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm4910-201ENSMUST00000119605 366 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm6461-201ENSMUST00000120015 633 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm25292-201ENSMUST00000122797 322 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.55□□□□□ -2
Tnfsf4P43488 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.55□□□□□ -2
Tnfsf4P43488 Snora81-201ENSMUST00000157310 178 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm25520-201ENSMUST00000158389 118 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm22853-201ENSMUST00000174974 131 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm18748-201ENSMUST00000198507 622 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.55□□□□□ -2
Tnfsf4P43488 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Tnfsf4P43488 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.55□□□□□ -2
Tnfsf4P43488 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.55□□□□□ -2
Tnfsf4P43488 AC091783.4-201ENSMUST00000224940 611 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.55□□□□□ -2
Tnfsf4P43488 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Tnfsf4P43488 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.55□□□□□ -2
Tnfsf4P43488 Gm23455-201ENSMUST00000083331 100 ntBASIC2.55□□□□□ -2
Tnfsf4P43488 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Tnfsf4P43488 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Tnfsf4P43488 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.54□□□□□ -2
Tnfsf4P43488 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Tnfsf4P43488 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Tnfsf4P43488 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.54□□□□□ -2
Tnfsf4P43488 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Tnfsf4P43488 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Tnfsf4P43488 Gm22676-201ENSMUST00000116972 129 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm11221-201ENSMUST00000117230 597 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC2.54□□□□□ -2
Tnfsf4P43488 Gm12617-201ENSMUST00000121268 381 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm7846-201ENSMUST00000145844 274 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm23599-201ENSMUST00000157261 251 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm25280-201ENSMUST00000157269 101 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm26411-201ENSMUST00000157668 107 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Mir5098-201ENSMUST00000175320 82 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm20673-201ENSMUST00000177167 430 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm6140-201ENSMUST00000192494 966 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm43521-201ENSMUST00000197838 255 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm24350-202ENSMUST00000198309 132 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm43107-201ENSMUST00000198729 255 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm3010-201ENSMUST00000198805 448 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm5551-201ENSMUST00000199720 690 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 Gm43090-201ENSMUST00000202459 314 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.54□□□□□ -2
Tnfsf4P43488 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 AC160931.2-201ENSMUST00000221445 351 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.54□□□□□ -2
Tnfsf4P43488 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.54□□□□□ -2
Tnfsf4P43488 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Tnfsf4P43488 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.53□□□□□ -2
Tnfsf4P43488 Gm38375-201ENSMUST00000194610 2227 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Tnfsf4P43488 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Tnfsf4P43488 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Tnfsf4P43488 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Tnfsf4P43488 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
Tnfsf4P43488 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.53□□□□□ -2
Tnfsf4P43488 Gm11708-201ENSMUST00000119530 832 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Gm14927-201ENSMUST00000120283 454 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Gm14101-201ENSMUST00000121502 473 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2.53□□□□□ -2
Tnfsf4P43488 Gm24475-201ENSMUST00000157435 143 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Gm24240-201ENSMUST00000157785 135 ntBASIC2.53□□□□□ -2
Tnfsf4P43488 Gm24436-201ENSMUST00000157889 302 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms