Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm38231-201ENSMUST00000192030 347 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gm45551-201ENSMUST00000211459 928 ntBASIC4.16□□□□□ -1.74
Traf1P39428 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gm21007-201ENSMUST00000221024 326 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.16□□□□□ -1.74
Traf1P39428 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.16□□□□□ -1.74
Traf1P39428 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.16□□□□□ -1.74
Traf1P39428 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Traf1P39428 Gm6369-201ENSMUST00000069626 412 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Gm24254-201ENSMUST00000083702 104 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Traf1P39428 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.16□□□□□ -1.74
Traf1P39428 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Traf1P39428 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.74
Traf1P39428 Gm14731-201ENSMUST00000119216 376 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm14739-201ENSMUST00000120424 802 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.15□□□□□ -1.75
Traf1P39428 Gm24059-201ENSMUST00000157493 312 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm25860-201ENSMUST00000158252 126 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm25835-201ENSMUST00000158917 144 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm25026-201ENSMUST00000175017 188 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm26141-201ENSMUST00000175299 126 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Traf1P39428 Gm27342-201ENSMUST00000183530 109 ntBASIC4.15□□□□□ -1.75
Traf1P39428 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Traf1P39428 Mir703-201ENSMUST00000197105 109 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.15□□□□□ -1.75
Traf1P39428 Gm43992-201ENSMUST00000204358 197 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.15□□□□□ -1.75
Traf1P39428 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm45080-201ENSMUST00000206648 283 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.15□□□□□ -1.75
Traf1P39428 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.15□□□□□ -1.75
Traf1P39428 Gm6842-201ENSMUST00000211361 390 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm3333-202ENSMUST00000221763 1044 ntBASIC4.15□□□□□ -1.75
Traf1P39428 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.15□□□□□ -1.75
Traf1P39428 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Traf1P39428 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Traf1P39428 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Traf1P39428 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Traf1P39428 AF357341-201ENSMUST00000083088 75 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm8074-201ENSMUST00000095071 252 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Traf1P39428 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Traf1P39428 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Traf1P39428 Gm8675-201ENSMUST00000201408 1856 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Traf1P39428 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.15□□□□□ -1.75
Traf1P39428 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Traf1P39428 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Traf1P39428 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Traf1P39428 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Mir667-201ENSMUST00000102441 92 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm22590-201ENSMUST00000104247 128 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm11367-201ENSMUST00000117802 120 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm6797-201ENSMUST00000119440 512 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm11830-201ENSMUST00000120175 561 ntBASIC4.14□□□□□ -1.75
Traf1P39428 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.14□□□□□ -1.75
Traf1P39428 Gm22186-201ENSMUST00000157822 122 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm24314-201ENSMUST00000158274 123 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm23775-201ENSMUST00000158991 249 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.14□□□□□ -1.75
Traf1P39428 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Gm33571-201ENSMUST00000193271 657 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm36943-201ENSMUST00000194422 282 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.14□□□□□ -1.75
Traf1P39428 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.14□□□□□ -1.75
Traf1P39428 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm2314-201ENSMUST00000200391 586 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.14□□□□□ -1.75
Traf1P39428 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC4.14□□□□□ -1.75
Traf1P39428 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Gm4052-201ENSMUST00000220890 451 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Gm18921-201ENSMUST00000221798 366 ntBASIC4.14□□□□□ -1.75
Traf1P39428 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Traf1P39428 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Traf1P39428 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Traf1P39428 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Traf1P39428 Gm5583-201ENSMUST00000174328 1519 ntBASIC4.14□□□□□ -1.75
Traf1P39428 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Traf1P39428 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Traf1P39428 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Traf1P39428 Gm14125-201ENSMUST00000113442 680 ntBASIC4.13□□□□□ -1.75
Traf1P39428 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms