Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm27490-201ENSMUST00000184754 128 ntBASIC5.4□□□□□ -1.54
Pde6bP23440 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.4□□□□□ -1.54
Pde6bP23440 Gm42428-201ENSMUST00000198677 302 ntBASIC5.4□□□□□ -1.54
Pde6bP23440 Gm8719-201ENSMUST00000203602 534 ntBASIC5.4□□□□□ -1.54
Pde6bP23440 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.4□□□□□ -1.54
Pde6bP23440 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.4□□□□□ -1.54
Pde6bP23440 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.4□□□□□ -1.54
Pde6bP23440 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.4□□□□□ -1.54
Pde6bP23440 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Pde6bP23440 Gm26447-201ENSMUST00000082448 129 ntBASIC5.4□□□□□ -1.54
Pde6bP23440 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pde6bP23440 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pde6bP23440 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.4□□□□□ -1.55
Pde6bP23440 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
Pde6bP23440 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.4□□□□□ -1.55
Pde6bP23440 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Pde6bP23440 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Pde6bP23440 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Pde6bP23440 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Pde6bP23440 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pde6bP23440 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Pde6bP23440 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.39□□□□□ -1.55
Pde6bP23440 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Pde6bP23440 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Pde6bP23440 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Pde6bP23440 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm11633-201ENSMUST00000118176 444 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm12137-201ENSMUST00000119565 346 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm12691-201ENSMUST00000120186 456 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm12815-201ENSMUST00000121737 135 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm25103-201ENSMUST00000122671 318 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.39□□□□□ -1.55
Pde6bP23440 Gm26102-201ENSMUST00000157251 284 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm22084-201ENSMUST00000157585 105 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm22726-201ENSMUST00000158089 179 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm24175-201ENSMUST00000158931 129 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Mir3112-201ENSMUST00000175431 82 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm20657-201ENSMUST00000177079 515 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm27387-201ENSMUST00000184583 116 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Pde6bP23440 Gm23925-202ENSMUST00000188429 132 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.39□□□□□ -1.55
Pde6bP23440 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm46389-201ENSMUST00000223199 392 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pde6bP23440 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pde6bP23440 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Pde6bP23440 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Pde6bP23440 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Pde6bP23440 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Pde6bP23440 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.39□□□□□ -1.55
Pde6bP23440 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pde6bP23440 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Pde6bP23440 Gm13491-201ENSMUST00000118267 235 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm13880-201ENSMUST00000118421 474 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm13518-201ENSMUST00000120018 233 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm11830-201ENSMUST00000120175 561 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm15147-201ENSMUST00000122263 483 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Pde6bP23440 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.38□□□□□ -1.55
Pde6bP23440 Gm16358-201ENSMUST00000146046 210 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm23779-201ENSMUST00000157938 64 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm23179-201ENSMUST00000158693 304 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm16114-201ENSMUST00000161930 300 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pde6bP23440 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm24518-201ENSMUST00000180275 94 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.38□□□□□ -1.55
Pde6bP23440 Mir6410-201ENSMUST00000184204 104 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Mir6926-201ENSMUST00000184562 68 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm8939-201ENSMUST00000192577 964 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm19326-201ENSMUST00000219818 326 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Gm5955-201ENSMUST00000222712 219 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Pde6bP23440 Olfr713-201ENSMUST00000098139 975 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pde6bP23440 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pde6bP23440 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.38□□□□□ -1.55
Pde6bP23440 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pde6bP23440 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Pde6bP23440 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pde6bP23440 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Pde6bP23440 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Pde6bP23440 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pde6bP23440 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pde6bP23440 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Pde6bP23440 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Pde6bP23440 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.37□□□□□ -1.55
Pde6bP23440 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms