Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm23925-201ENSMUST00000082471 132 ntBASIC3.01□□□□□ -1.93
P20040 Snora7a-201ENSMUST00000082629 140 ntBASIC3.01□□□□□ -1.93
P20040 Gm26203-201ENSMUST00000082911 114 ntBASIC3.01□□□□□ -1.93
P20040 Gm23104-201ENSMUST00000083722 104 ntBASIC3.01□□□□□ -1.93
P20040 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
P20040 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
P20040 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
P20040 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.01□□□□□ -1.93
P20040 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.01□□□□□ -1.93
P20040 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
P20040 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
P20040 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
P20040 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
P20040 Gm2348-201ENSMUST00000108782 300 ntBASIC3□□□□□ -1.93
P20040 Gm15125-201ENSMUST00000116185 800 ntBASIC3□□□□□ -1.93
P20040 Gm13076-201ENSMUST00000118041 204 ntBASIC3□□□□□ -1.93
P20040 Gm5762-201ENSMUST00000119204 258 ntBASIC3□□□□□ -1.93
P20040 Gm11693-201ENSMUST00000119625 565 ntBASIC3□□□□□ -1.93
P20040 Gm12515-201ENSMUST00000120116 361 ntBASIC3□□□□□ -1.93
P20040 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3□□□□□ -1.93
P20040 Gm4725-201ENSMUST00000151048 587 ntBASIC3□□□□□ -1.93
P20040 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3□□□□□ -1.93
P20040 Gm25860-201ENSMUST00000158252 126 ntBASIC3□□□□□ -1.93
P20040 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3□□□□□ -1.93
P20040 Gm26141-201ENSMUST00000175299 126 ntBASIC3□□□□□ -1.93
P20040 Mir3106-201ENSMUST00000175401 82 ntBASIC3□□□□□ -1.93
P20040 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3□□□□□ -1.93
P20040 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3□□□□□ -1.93
P20040 Gm28148-201ENSMUST00000186924 697 ntBASIC3□□□□□ -1.93
P20040 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3□□□□□ -1.93
P20040 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3□□□□□ -1.93
P20040 Gm43096-201ENSMUST00000196173 421 ntBASIC3□□□□□ -1.93
P20040 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3□□□□□ -1.93
P20040 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3□□□□□ -1.93
P20040 Gm44727-201ENSMUST00000204225 451 ntBASIC3□□□□□ -1.93
P20040 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3□□□□□ -1.93
P20040 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
P20040 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
P20040 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3□□□□□ -1.93
P20040 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3□□□□□ -1.93
P20040 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3□□□□□ -1.93
P20040 AC091783.5-201ENSMUST00000224928 671 ntBASIC3□□□□□ -1.93
P20040 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3□□□□□ -1.93
P20040 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3□□□□□ -1.93
P20040 Gm22304-201ENSMUST00000082688 129 ntBASIC3□□□□□ -1.93
P20040 Gm24147-201ENSMUST00000082763 144 ntBASIC3□□□□□ -1.93
P20040 n-R5s50-201ENSMUST00000083168 111 ntBASIC3□□□□□ -1.93
P20040 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3□□□□□ -1.93
P20040 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
P20040 Gm44708-201ENSMUST00000205580 2237 ntBASIC3□□□□□ -1.93
P20040 Gm44150-201ENSMUST00000203317 2619 ntBASIC3□□□□□ -1.93
P20040 Gm44846-201ENSMUST00000207127 3243 ntBASIC3□□□□□ -1.93
P20040 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
P20040 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.99□□□□□ -1.93
P20040 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
P20040 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
P20040 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.99□□□□□ -1.93
P20040 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
P20040 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
P20040 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
P20040 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
P20040 Gm15060-201ENSMUST00000119550 948 ntBASIC2.99□□□□□ -1.93
P20040 Gm22960-201ENSMUST00000122517 104 ntBASIC2.99□□□□□ -1.93
P20040 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.99□□□□□ -1.93
P20040 Gm25572-201ENSMUST00000157527 172 ntBASIC2.99□□□□□ -1.93
P20040 Gm27592-201ENSMUST00000157729 126 ntBASIC2.99□□□□□ -1.93
P20040 Mir1934-201ENSMUST00000158127 83 ntBASIC2.99□□□□□ -1.93
P20040 Gm23387-201ENSMUST00000158586 107 ntBASIC2.99□□□□□ -1.93
P20040 Gm17038-201ENSMUST00000166586 494 ntBASIC2.99□□□□□ -1.93
P20040 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
P20040 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC2.99□□□□□ -1.93
P20040 Gm22174-201ENSMUST00000175050 125 ntBASIC2.99□□□□□ -1.93
P20040 Gm22692-201ENSMUST00000175055 125 ntBASIC2.99□□□□□ -1.93
P20040 Gm27634-201ENSMUST00000175060 126 ntBASIC2.99□□□□□ -1.93
P20040 Gm22460-201ENSMUST00000175269 124 ntBASIC2.99□□□□□ -1.93
P20040 Gm25535-201ENSMUST00000175364 125 ntBASIC2.99□□□□□ -1.93
P20040 Gm24365-201ENSMUST00000175384 125 ntBASIC2.99□□□□□ -1.93
P20040 Gm44310-201ENSMUST00000175424 126 ntBASIC2.99□□□□□ -1.93
P20040 Gm22639-201ENSMUST00000175591 125 ntBASIC2.99□□□□□ -1.93
P20040 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.99□□□□□ -1.93
P20040 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.99□□□□□ -1.93
P20040 Gm24979-201ENSMUST00000178626 126 ntBASIC2.99□□□□□ -1.93
P20040 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
P20040 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
P20040 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
P20040 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
P20040 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
P20040 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
P20040 Gm27743-201ENSMUST00000185136 126 ntBASIC2.99□□□□□ -1.93
P20040 Gm43704-201ENSMUST00000196164 496 ntBASIC2.99□□□□□ -1.93
P20040 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
P20040 Gm43407-201ENSMUST00000199816 317 ntBASIC2.99□□□□□ -1.93
P20040 Gm43979-201ENSMUST00000203179 475 ntBASIC2.99□□□□□ -1.93
P20040 Gm35405-201ENSMUST00000218754 400 ntBASIC2.99□□□□□ -1.93
P20040 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC2.99□□□□□ -1.93
P20040 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.99□□□□□ -1.93
P20040 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.99□□□□□ -1.93
P20040 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
P20040 AF357341-201ENSMUST00000083088 75 ntBASIC2.99□□□□□ -1.93
P20040 Mir323-201ENSMUST00000083683 86 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms