Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 Gm5777-201ENSMUST00000177265 448 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm29031-201ENSMUST00000185316 614 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC5.32□□□□□ -1.56
RaraP11416 Gm29000-201ENSMUST00000185444 614 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm28204-201ENSMUST00000185934 614 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm28290-201ENSMUST00000186505 614 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm28161-201ENSMUST00000186669 614 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm28749-209ENSMUST00000189599 614 ntBASIC5.32□□□□□ -1.56
RaraP11416 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RaraP11416 Gm33163-201ENSMUST00000194504 614 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm6105-201ENSMUST00000200580 624 ntBASIC5.32□□□□□ -1.56
RaraP11416 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 Gm44016-201ENSMUST00000203463 164 ntBASIC5.32□□□□□ -1.56
RaraP11416 Gm45200-201ENSMUST00000207434 919 ntBASIC5.32□□□□□ -1.56
RaraP11416 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.32□□□□□ -1.56
RaraP11416 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RaraP11416 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC5.32□□□□□ -1.56
RaraP11416 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.32□□□□□ -1.56
RaraP11416 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.32□□□□□ -1.56
RaraP11416 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RaraP11416 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.31□□□□□ -1.56
RaraP11416 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RaraP11416 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Gm25418-201ENSMUST00000104214 129 ntBASIC5.31□□□□□ -1.56
RaraP11416 Mir875-201ENSMUST00000104698 78 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Mir466j-201ENSMUST00000116876 122 ntBASIC5.31□□□□□ -1.56
RaraP11416 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm8129-201ENSMUST00000118230 213 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm15195-201ENSMUST00000118775 263 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm11849-201ENSMUST00000121293 261 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.31□□□□□ -1.56
RaraP11416 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Gm25883-201ENSMUST00000157781 271 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm25454-201ENSMUST00000157947 315 ntBASIC5.31□□□□□ -1.56
RaraP11416 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Gm20397-201ENSMUST00000174520 362 ntBASIC5.31□□□□□ -1.56
RaraP11416 Mir6903-201ENSMUST00000183597 88 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm34176-201ENSMUST00000192621 474 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm37029-201ENSMUST00000195773 239 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm44319-201ENSMUST00000196974 93 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm43407-201ENSMUST00000199816 317 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Gm45032-201ENSMUST00000205375 520 ntBASIC5.31□□□□□ -1.56
RaraP11416 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.31□□□□□ -1.56
RaraP11416 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.31□□□□□ -1.56
RaraP11416 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Gm7768-201ENSMUST00000222988 597 ntBASIC5.31□□□□□ -1.56
RaraP11416 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.31□□□□□ -1.56
RaraP11416 Gm5045-201ENSMUST00000027054 810 ntBASIC5.31□□□□□ -1.56
RaraP11416 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RaraP11416 Gm23455-201ENSMUST00000083331 100 ntBASIC5.31□□□□□ -1.56
RaraP11416 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RaraP11416 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RaraP11416 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RaraP11416 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RaraP11416 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.3□□□□□ -1.56
RaraP11416 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RaraP11416 Gm12509-201ENSMUST00000118033 609 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm13491-201ENSMUST00000118267 235 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm12495-201ENSMUST00000119750 447 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm6062-201ENSMUST00000120462 631 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RaraP11416 Gm23250-201ENSMUST00000157444 267 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.3□□□□□ -1.56
RaraP11416 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.3□□□□□ -1.56
RaraP11416 Mir3062-201ENSMUST00000174986 105 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm9022-202ENSMUST00000183285 483 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.3□□□□□ -1.56
RaraP11416 Gm8874-201ENSMUST00000196826 286 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm44776-201ENSMUST00000207212 381 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm44811-201ENSMUST00000209120 228 ntBASIC5.3□□□□□ -1.56
RaraP11416 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms