Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14880-201ENSMUST00000117581 292 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm15297-201ENSMUST00000117795 290 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm6829-201ENSMUST00000119858 360 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm14770-201ENSMUST00000122197 312 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm11506-201ENSMUST00000122414 470 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm23197-201ENSMUST00000158809 112 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm24304-201ENSMUST00000177635 107 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm37713-201ENSMUST00000191746 198 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd3P09027 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm19243-201ENSMUST00000198592 269 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm45273-201ENSMUST00000211559 281 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC4.46□□□□□ -1.7
Hoxd3P09027 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm10916-201ENSMUST00000080330 483 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm22061-201ENSMUST00000082557 107 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd3P09027 AC124516.3-201ENSMUST00000221302 3613 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd3P09027 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.46□□□□□ -1.7
Hoxd3P09027 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Hoxd3P09027 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd3P09027 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hoxd3P09027 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm45493-201ENSMUST00000209494 3948 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm26067-201ENSMUST00000103789 110 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Snord19-201ENSMUST00000104609 76 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm11737-201ENSMUST00000118713 468 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm15206-201ENSMUST00000119143 454 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm12936-201ENSMUST00000121439 301 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm24481-201ENSMUST00000157210 102 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm22650-201ENSMUST00000175138 105 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Mir669k-201ENSMUST00000177742 127 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm25024-201ENSMUST00000179667 104 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm25673-201ENSMUST00000179957 127 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm27849-201ENSMUST00000183673 125 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm27887-201ENSMUST00000184367 102 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm38015-201ENSMUST00000193048 188 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm18341-201ENSMUST00000197538 622 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm29736-201ENSMUST00000198189 385 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm6615-201ENSMUST00000199426 631 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Mir219c-201ENSMUST00000199860 60 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm45513-201ENSMUST00000210228 376 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm37788-201ENSMUST00000193958 2705 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm45179-201ENSMUST00000208452 4337 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.45□□□□□ -1.7
Hoxd3P09027 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hoxd3P09027 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hoxd3P09027 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd3P09027 Fam26d-202ENSMUST00000218239 3075 ntBASIC4.44□□□□□ -1.7
Hoxd3P09027 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hoxd3P09027 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hoxd3P09027 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms