Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm16290-201ENSMUST00000161175 474 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm27355-201ENSMUST00000185045 128 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm21673-201ENSMUST00000186640 436 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm21135-201ENSMUST00000189023 436 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm28769-201ENSMUST00000190176 615 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm36934-201ENSMUST00000192007 306 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm43828-201ENSMUST00000196890 639 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm42850-201ENSMUST00000202094 201 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm18325-201ENSMUST00000203228 835 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm19908-201ENSMUST00000204684 391 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm44132-201ENSMUST00000205142 151 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm44583-201ENSMUST00000207478 281 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm45375-201ENSMUST00000210338 280 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm18320-201ENSMUST00000211304 595 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 AL929417.1-201ENSMUST00000214901 124 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Trim55G3X8Y1 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.65
Trim55G3X8Y1 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm22831-201ENSMUST00000102473 109 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm14868-201ENSMUST00000117840 216 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm14875-201ENSMUST00000120881 319 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm23496-201ENSMUST00000157741 248 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm22534-201ENSMUST00000158173 104 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm24225-201ENSMUST00000158825 98 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm24737-201ENSMUST00000158861 100 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm3216-201ENSMUST00000166927 486 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm20543-201ENSMUST00000174200 726 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm25243-201ENSMUST00000174912 207 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Mir3090-201ENSMUST00000175597 87 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm26092-201ENSMUST00000179798 97 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Mir6539-201ENSMUST00000183732 110 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Mir6417-201ENSMUST00000183815 116 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm43723-201ENSMUST00000196886 189 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm19147-201ENSMUST00000199622 652 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm42665-201ENSMUST00000202100 586 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm44060-201ENSMUST00000204440 410 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm44870-201ENSMUST00000207291 357 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 AC113031.5-201ENSMUST00000227116 606 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm7676-201ENSMUST00000084055 319 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim55G3X8Y1 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Trim55G3X8Y1 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Trim55G3X8Y1 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm24350-201ENSMUST00000104163 133 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm13386-201ENSMUST00000117677 124 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm11854-201ENSMUST00000117839 446 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm17014-201ENSMUST00000120765 168 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm12422-201ENSMUST00000121431 302 ntBASIC4.76□□□□□ -1.65
Trim55G3X8Y1 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms