Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm25420-201ENSMUST00000104216 127 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Mir294-201ENSMUST00000104710 84 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm22488-201ENSMUST00000116811 127 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm23084-201ENSMUST00000157850 114 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm9587-201ENSMUST00000172449 454 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm28002-201ENSMUST00000184832 100 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.97□□□□□ -1.93
CtcflA2APF3 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm7897-201ENSMUST00000193981 554 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm18602-201ENSMUST00000209794 851 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CtcflA2APF3 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm18557-201ENSMUST00000218710 433 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm7119-201ENSMUST00000221345 695 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.97□□□□□ -1.93
CtcflA2APF3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.97□□□□□ -1.93
CtcflA2APF3 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm12582-201ENSMUST00000030555 697 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm22575-201ENSMUST00000082981 110 ntBASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CtcflA2APF3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.97□□□□□ -1.93
CtcflA2APF3 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.96□□□□□ -1.93
CtcflA2APF3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm44120-201ENSMUST00000203022 3023 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm25313-201ENSMUST00000101817 116 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm15282-201ENSMUST00000117707 300 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm15014-201ENSMUST00000120742 258 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm15488-201ENSMUST00000121682 670 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm25058-201ENSMUST00000157365 128 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm22310-201ENSMUST00000157509 116 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm20612-201ENSMUST00000176318 236 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm23287-201ENSMUST00000179427 116 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm23143-201ENSMUST00000180137 116 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm25120-201ENSMUST00000180148 79 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Mir6386-201ENSMUST00000183558 104 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm43521-201ENSMUST00000197838 255 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm43107-201ENSMUST00000198729 255 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm42818-201ENSMUST00000198869 987 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm44030-201ENSMUST00000204865 432 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm9375-201ENSMUST00000208899 903 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm34779-201ENSMUST00000210036 263 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm7380-201ENSMUST00000211599 466 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CtcflA2APF3 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CtcflA2APF3 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CtcflA2APF3 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm24871-201ENSMUST00000083099 116 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm25480-201ENSMUST00000083217 133 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm23136-201ENSMUST00000083425 99 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.96□□□□□ -1.94
CtcflA2APF3 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
CtcflA2APF3 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm13329-201ENSMUST00000117063 265 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm16100-201ENSMUST00000120489 231 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm14577-201ENSMUST00000121134 256 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm8840-201ENSMUST00000122454 386 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CtcflA2APF3 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm15974-201ENSMUST00000159103 531 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm5929-201ENSMUST00000166883 487 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm17164-201ENSMUST00000169013 506 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CtcflA2APF3 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CtcflA2APF3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms