Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trav11A0A0B4J1J9 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Trav11A0A0B4J1J9 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.34□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.34□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trav11A0A0B4J1J9 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12889-201ENSMUST00000118684 241 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm16216-201ENSMUST00000118970 1111 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm14731-201ENSMUST00000119216 376 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7308-201ENSMUST00000121087 447 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12998-201ENSMUST00000122445 789 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22957-201ENSMUST00000122511 123 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm24720-201ENSMUST00000157518 166 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm23540-201ENSMUST00000157543 164 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm8296-201ENSMUST00000185597 524 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28615-201ENSMUST00000187527 482 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm29330-201ENSMUST00000190032 699 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm19498-201ENSMUST00000191128 331 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28098-201ENSMUST00000191361 699 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43224-201ENSMUST00000201567 898 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44634-201ENSMUST00000206119 152 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44585-201ENSMUST00000207150 607 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm45553-201ENSMUST00000209929 507 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm45327-201ENSMUST00000211612 565 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 AC130673.2-201ENSMUST00000228091 797 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm10088-201ENSMUST00000074116 423 ntBASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav11A0A0B4J1J9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm38699-201ENSMUST00000221301 1740 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22272-201ENSMUST00000104039 134 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm13567-201ENSMUST00000118026 247 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12268-201ENSMUST00000118398 442 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm11704-201ENSMUST00000120031 214 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm13692-201ENSMUST00000120774 371 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm12317-201ENSMUST00000122307 319 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm23671-201ENSMUST00000157472 103 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22769-201ENSMUST00000158367 98 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm10357-201ENSMUST00000159886 264 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm16285-201ENSMUST00000162999 347 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm17186-201ENSMUST00000171742 456 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm20450-201ENSMUST00000173652 147 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22395-201ENSMUST00000177427 96 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm26365-201ENSMUST00000179177 94 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm28010-201ENSMUST00000179485 126 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm37288-201ENSMUST00000193963 334 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm9632-201ENSMUST00000195934 643 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43043-201ENSMUST00000196579 412 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43541-201ENSMUST00000197208 581 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm6012-201ENSMUST00000210821 730 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm18043-201ENSMUST00000216741 739 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 AC158525.1-201ENSMUST00000223806 576 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm9765-201ENSMUST00000043170 321 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.32□□□□□ -2.04
Trav11A0A0B4J1J9 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav11A0A0B4J1J9 Gm22657-201ENSMUST00000104197 132 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms