Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm25727-201ENSMUST00000104522 131 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm12636-201ENSMUST00000117395 624 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm15110-201ENSMUST00000117545 881 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm15148-201ENSMUST00000117602 156 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm13076-201ENSMUST00000118041 204 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Mup-ps14-201ENSMUST00000118437 532 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm13640-201ENSMUST00000118445 264 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm14301-201ENSMUST00000120181 324 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm9001-201ENSMUST00000121642 399 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm23754-201ENSMUST00000157576 63 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm24289-201ENSMUST00000157629 135 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm6374-201ENSMUST00000159051 788 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm5263-201ENSMUST00000163646 601 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm9890-201ENSMUST00000171867 537 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm29516-201ENSMUST00000190402 468 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm38333-201ENSMUST00000193608 604 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm38154-201ENSMUST00000195444 340 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm43004-201ENSMUST00000201872 703 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm18441-201ENSMUST00000223539 617 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Snora70-201ENSMUST00000083047 137 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Gm23452-201ENSMUST00000083327 107 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
H2afb2S4R1M3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm14007-201ENSMUST00000118288 210 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm14977-201ENSMUST00000121626 812 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm25667-201ENSMUST00000157701 275 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm24768-201ENSMUST00000158512 94 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm22532-201ENSMUST00000158822 140 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm2930-201ENSMUST00000170403 474 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm27648-201ENSMUST00000184315 107 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm42857-201ENSMUST00000200823 339 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm18597-201ENSMUST00000209519 694 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm18507-201ENSMUST00000218855 525 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm23136-201ENSMUST00000083425 99 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm22578-201ENSMUST00000083730 107 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm21286-201ENSMUST00000098035 545 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb2S4R1M3 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
H2afb2S4R1M3 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H2afb2S4R1M3 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms