Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.29□□□□□ -1.88
Trim3Q9R1R2 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm23532-201ENSMUST00000104569 112 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm14677-201ENSMUST00000117866 486 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm2003-201ENSMUST00000118537 636 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm14975-201ENSMUST00000118741 664 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm12739-201ENSMUST00000119769 382 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm12858-201ENSMUST00000121913 208 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm14253-201ENSMUST00000122112 639 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm1989-201ENSMUST00000126244 636 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm13194-201ENSMUST00000142299 311 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm22320-201ENSMUST00000157149 312 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm26349-201ENSMUST00000157530 130 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm22516-201ENSMUST00000158266 124 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Mir3106-201ENSMUST00000175401 82 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Mir6401-201ENSMUST00000184499 109 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm28030-201ENSMUST00000184987 138 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm44355-201ENSMUST00000200417 104 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm8209-201ENSMUST00000206386 553 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm45245-201ENSMUST00000210082 376 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Gm23452-201ENSMUST00000083327 107 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.28□□□□□ -1.88
Trim3Q9R1R2 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm13379-201ENSMUST00000118053 621 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm15014-201ENSMUST00000120742 258 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm11233-201ENSMUST00000122357 634 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm24289-201ENSMUST00000157629 135 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm16101-201ENSMUST00000160695 430 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm27760-201ENSMUST00000185048 114 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm6680-201ENSMUST00000192789 950 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm8242-202ENSMUST00000193056 475 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm33571-201ENSMUST00000193271 657 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm44266-201ENSMUST00000205235 500 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm18410-201ENSMUST00000207199 577 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm18645-201ENSMUST00000209593 651 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm17911-201ENSMUST00000210806 877 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm8681-201ENSMUST00000219115 618 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm18116-201ENSMUST00000220920 537 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim3Q9R1R2 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Gm12458-201ENSMUST00000119387 495 ntBASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Gm12383-201ENSMUST00000120628 760 ntBASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Gm25667-201ENSMUST00000157701 275 ntBASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Gm23666-201ENSMUST00000158053 116 ntBASIC3.26□□□□□ -1.89
Trim3Q9R1R2 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Gm25198-201ENSMUST00000178574 110 ntBASIC3.26□□□□□ -1.89
Trim3Q9R1R2 Gm7909-201ENSMUST00000182688 614 ntBASIC3.26□□□□□ -1.89
Trim3Q9R1R2 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms