Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm37576-201ENSMUST00000194228 372 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm44223-201ENSMUST00000204854 114 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm44259-201ENSMUST00000204996 298 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm44294-201ENSMUST00000205090 728 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm24928-201ENSMUST00000083399 107 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Gm25897-201ENSMUST00000083709 107 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trem1Q9JKE2 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.05□□□□□ -1.92
Trem1Q9JKE2 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 AC134860.3-201ENSMUST00000223564 1300 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm14810-201ENSMUST00000121628 486 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm25436-201ENSMUST00000158275 145 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm25960-201ENSMUST00000175110 125 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm10067-201ENSMUST00000179462 348 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm27999-201ENSMUST00000183539 193 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Mir7235-201ENSMUST00000183796 56 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm27715-201ENSMUST00000184714 260 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm2950-201ENSMUST00000185530 520 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm29330-201ENSMUST00000190032 699 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm28098-201ENSMUST00000191361 699 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm44099-201ENSMUST00000203299 112 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm44332-201ENSMUST00000203712 433 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm18462-201ENSMUST00000208112 417 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm45434-201ENSMUST00000210550 293 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm18557-201ENSMUST00000218710 433 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm4017-201ENSMUST00000084813 338 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trem1Q9JKE2 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm25765-201ENSMUST00000104100 132 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm12268-201ENSMUST00000118398 442 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm12252-201ENSMUST00000119517 219 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm12884-201ENSMUST00000120371 325 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm8840-201ENSMUST00000122454 386 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm19807-201ENSMUST00000173971 667 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm22858-201ENSMUST00000174972 76 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm25999-201ENSMUST00000175398 133 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm29658-201ENSMUST00000185404 230 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm17790-201ENSMUST00000191545 1228 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm18791-201ENSMUST00000204611 726 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm44852-201ENSMUST00000207950 369 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm19540-201ENSMUST00000221843 810 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm19786-201ENSMUST00000222589 580 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Gm23452-201ENSMUST00000083327 107 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.03□□□□□ -1.92
Trem1Q9JKE2 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trem1Q9JKE2 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms