Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm9845-201ENSMUST00000056409 598 ntBASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Gm23925-201ENSMUST00000082471 132 ntBASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trem3Q9JKE1 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm24792-201ENSMUST00000104286 128 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm14825-201ENSMUST00000113538 701 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm14142-201ENSMUST00000117833 296 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm12902-201ENSMUST00000118389 322 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm11582-201ENSMUST00000121041 236 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm14577-201ENSMUST00000121134 256 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm11414-201ENSMUST00000121795 263 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm16363-201ENSMUST00000132460 877 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm6265-201ENSMUST00000149263 231 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm22187-201ENSMUST00000157819 129 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm22789-201ENSMUST00000157884 130 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm17194-201ENSMUST00000164610 348 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Mir3104-201ENSMUST00000174911 63 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm22858-201ENSMUST00000174972 76 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm44030-201ENSMUST00000204865 432 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm17838-201ENSMUST00000205872 876 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm6112-201ENSMUST00000208037 629 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm5176-202ENSMUST00000220267 583 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm24144-201ENSMUST00000082632 111 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm24147-201ENSMUST00000082763 144 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm22829-201ENSMUST00000083771 106 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.34□□□□□ -2.03
Trem3Q9JKE1 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
Trem3Q9JKE1 Gm28359-201ENSMUST00000187470 1322 ntBASIC2.34□□□□□ -2.04
Trem3Q9JKE1 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
Trem3Q9JKE1 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
Trem3Q9JKE1 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Mir499-201ENSMUST00000102357 79 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm14981-201ENSMUST00000117325 943 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm5754-201ENSMUST00000118774 892 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm15019-201ENSMUST00000120148 434 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm24730-201ENSMUST00000158228 117 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm22416-201ENSMUST00000158590 88 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm25119-201ENSMUST00000158815 88 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm37085-201ENSMUST00000193780 196 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm37007-201ENSMUST00000194234 319 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm37523-201ENSMUST00000194901 412 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm43039-201ENSMUST00000202883 963 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm31532-201ENSMUST00000203555 767 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm45588-201ENSMUST00000211213 630 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Gm22043-201ENSMUST00000082993 158 ntBASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trem3Q9JKE1 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trem3Q9JKE1 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm23942-201ENSMUST00000101956 107 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm25420-201ENSMUST00000104216 127 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm23609-201ENSMUST00000104542 127 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm11576-201ENSMUST00000117433 417 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm7123-201ENSMUST00000117647 213 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm15001-201ENSMUST00000117657 795 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm12213-201ENSMUST00000119924 353 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm22561-201ENSMUST00000157331 84 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm23325-201ENSMUST00000157422 129 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm24745-201ENSMUST00000157840 85 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm23895-201ENSMUST00000158108 160 ntBASIC2.32□□□□□ -2.04
Trem3Q9JKE1 Gm24736-201ENSMUST00000158862 130 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms