Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm43374-201ENSMUST00000202498 2391 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm26376-201ENSMUST00000104784 110 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm22194-201ENSMUST00000116869 95 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm12509-201ENSMUST00000118033 609 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm11761-201ENSMUST00000121392 445 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm23965-201ENSMUST00000157969 142 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm24191-201ENSMUST00000157977 122 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm28860-201ENSMUST00000188103 313 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm43749-201ENSMUST00000199345 352 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 AC241593.2-201ENSMUST00000225099 510 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ube3bQ9ES34 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm14803-201ENSMUST00000117163 361 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm3267-201ENSMUST00000118671 473 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm15357-201ENSMUST00000119160 285 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm23759-201ENSMUST00000158351 268 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm16125-201ENSMUST00000159003 339 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm16326-201ENSMUST00000162843 414 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Mir6416-201ENSMUST00000183664 117 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm38011-201ENSMUST00000193312 279 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 AC158622.1-201ENSMUST00000217107 230 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm45815-201ENSMUST00000220241 146 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 AC159709.1-201ENSMUST00000220445 349 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm29112-201ENSMUST00000188962 3487 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.12□□□□□ -1.43
Ube3bQ9ES34 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm24121-201ENSMUST00000102029 106 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Mir541-201ENSMUST00000102097 90 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm25595-201ENSMUST00000102273 97 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm13329-201ENSMUST00000117063 265 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm13396-201ENSMUST00000120617 271 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm15786-201ENSMUST00000121079 450 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm26279-201ENSMUST00000157095 102 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm25907-201ENSMUST00000158486 125 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm22529-201ENSMUST00000158817 123 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm9442-201ENSMUST00000194242 319 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm17775-201ENSMUST00000198542 258 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm36382-201ENSMUST00000198892 541 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm6112-201ENSMUST00000208037 629 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm17999-201ENSMUST00000211568 542 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm7128-201ENSMUST00000211639 533 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Snord15b-201ENSMUST00000083032 145 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Gm23095-201ENSMUST00000083446 107 ntBASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Ube3bQ9ES34 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms