Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm24610-201ENSMUST00000083270 109 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim54Q9ERP3 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm24120-201ENSMUST00000103978 129 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm25727-201ENSMUST00000104522 131 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm25560-201ENSMUST00000104606 176 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm24403-201ENSMUST00000104616 130 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm11372-201ENSMUST00000117348 570 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm11566-201ENSMUST00000118550 203 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm11869-201ENSMUST00000118701 329 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm14982-201ENSMUST00000121102 442 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm22480-201ENSMUST00000122568 128 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm24060-201ENSMUST00000157494 95 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm25883-201ENSMUST00000157781 271 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm25456-201ENSMUST00000157952 109 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm24393-201ENSMUST00000158135 97 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm22531-201ENSMUST00000158819 140 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm20415-201ENSMUST00000172877 423 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm23568-201ENSMUST00000177960 92 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Spin2g-201ENSMUST00000178425 687 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm24829-201ENSMUST00000179245 92 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm27676-201ENSMUST00000183669 61 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm37641-201ENSMUST00000193837 239 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm43556-201ENSMUST00000196186 681 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm18194-201ENSMUST00000210455 481 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.24□□□□□ -1.73
Trim54Q9ERP3 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm25509-201ENSMUST00000116985 106 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm12693-201ENSMUST00000121965 483 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm28802-201ENSMUST00000188624 944 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Gm44611-201ENSMUST00000207507 355 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC156560.1-201ENSMUST00000221425 256 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim54Q9ERP3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms