Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm24831-201ENSMUST00000116778 126 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm14987-201ENSMUST00000117820 676 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm25332-201ENSMUST00000158038 105 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm22766-201ENSMUST00000158372 99 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm37085-201ENSMUST00000193780 196 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm19177-201ENSMUST00000204520 613 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm18557-201ENSMUST00000218710 433 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Lima1Q9ERG0 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm24118-201ENSMUST00000103972 126 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm22026-201ENSMUST00000122735 281 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm17194-201ENSMUST00000164610 348 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm4479-201ENSMUST00000178807 171 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm7909-201ENSMUST00000182688 614 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm5268-201ENSMUST00000189212 940 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm5551-201ENSMUST00000199720 690 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm45078-201ENSMUST00000205343 546 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm45034-201ENSMUST00000206831 482 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Mir184-201ENSMUST00000083662 69 ntBASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Lima1Q9ERG0 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Mir294-201ENSMUST00000104710 84 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm3940-201ENSMUST00000105087 432 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm12803-201ENSMUST00000118907 821 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm8260-201ENSMUST00000119230 353 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm14881-201ENSMUST00000120366 372 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm15530-201ENSMUST00000122206 555 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm14804-201ENSMUST00000122322 508 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm22956-201ENSMUST00000122520 80 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm23791-201ENSMUST00000122553 293 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm23667-201ENSMUST00000157466 120 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm20672-201ENSMUST00000176605 261 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm21893-201ENSMUST00000179119 397 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Mir6405-201ENSMUST00000184584 124 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm29602-201ENSMUST00000186887 442 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.93□□□□□ -1.94
Lima1Q9ERG0 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms