Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm44395-201ENSMUST00000197056 153 ntBASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Gm43368-201ENSMUST00000200638 409 ntBASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Gm9712-201ENSMUST00000210842 311 ntBASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 CT009733.1-203ENSMUST00000224033 451 ntBASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm22532-201ENSMUST00000158822 140 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm26933-201ENSMUST00000182320 827 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37098-201ENSMUST00000192290 244 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37828-201ENSMUST00000192496 432 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm7299-201ENSMUST00000194441 581 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm44088-201ENSMUST00000204595 237 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm6842-201ENSMUST00000211361 390 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm8423-201ENSMUST00000211387 607 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm8681-201ENSMUST00000219115 618 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm5176-202ENSMUST00000220267 583 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm6841-201ENSMUST00000220602 598 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm22864-201ENSMUST00000083950 130 ntBASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc39Q9D5Y1 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm14591-201ENSMUST00000120407 518 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm13511-201ENSMUST00000121167 363 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm3123-201ENSMUST00000163480 480 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm27538-201ENSMUST00000185065 294 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm28466-201ENSMUST00000190678 659 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm5731-201ENSMUST00000190969 481 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37599-201ENSMUST00000193067 489 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm43932-201ENSMUST00000204499 52 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Gm7540-201ENSMUST00000219764 926 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Mir325-201ENSMUST00000083491 98 ntBASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm25097-201ENSMUST00000104042 145 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm13761-201ENSMUST00000117238 807 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm16100-201ENSMUST00000120489 231 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm15244-201ENSMUST00000121122 130 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm15974-201ENSMUST00000159103 531 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm22392-201ENSMUST00000177971 107 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm18692-201ENSMUST00000193047 511 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm44300-201ENSMUST00000196792 121 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm45226-201ENSMUST00000206602 288 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm9375-201ENSMUST00000208899 903 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Gm7948-201ENSMUST00000212607 844 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ccdc39Q9D5Y1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms